Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.77□□□□□ -0.37
CDK5Q00535 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.77□□□□□ -0.37
CDK5Q00535 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 AC098614.1-201ENST00000368528 745 ntBASIC12.76□□□□□ -0.37
CDK5Q00535 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.76□□□□□ -0.37
CDK5Q00535 FAM58BP-201ENST00000439056 645 ntBASIC12.76□□□□□ -0.37
CDK5Q00535 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 BTNL10-201ENST00000595971 695 ntBASIC12.76□□□□□ -0.37
CDK5Q00535 AL355385.1-201ENST00000606123 409 ntBASIC12.76□□□□□ -0.37
CDK5Q00535 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 AC133540.1-201ENST00000620845 1019 ntBASIC12.76□□□□□ -0.37
CDK5Q00535 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 AL139158.3-201ENST00000641212 1562 ntBASIC12.76□□□□□ -0.37
CDK5Q00535 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDK5Q00535 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CDK5Q00535 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CDK5Q00535 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CDK5Q00535 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CDK5Q00535 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CDK5Q00535 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.75□□□□□ -0.37
CDK5Q00535 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.75□□□□□ -0.37
CDK5Q00535 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.75□□□□□ -0.37
CDK5Q00535 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CDK5Q00535 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.75□□□□□ -0.37
CDK5Q00535 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
CDK5Q00535 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
CDK5Q00535 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.75□□□□□ -0.37
CDK5Q00535 KRT18P36-201ENST00000411618 1276 ntBASIC12.75□□□□□ -0.37
CDK5Q00535 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.75□□□□□ -0.37
CDK5Q00535 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 AHCYP4-201ENST00000419201 1315 ntBASIC12.75□□□□□ -0.37
CDK5Q00535 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.75□□□□□ -0.37
CDK5Q00535 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDK5Q00535 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.75□□□□□ -0.37
CDK5Q00535 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CDK5Q00535 TTTY23B-201ENST00000442790 549 ntBASIC12.75□□□□□ -0.37
CDK5Q00535 AC012441.2-201ENST00000444843 739 ntBASIC12.75□□□□□ -0.37
CDK5Q00535 HOMER2P2-201ENST00000451621 847 ntBASIC12.75□□□□□ -0.37
CDK5Q00535 RN7SL752P-201ENST00000463779 287 ntBASIC12.75□□□□□ -0.37
CDK5Q00535 AL160314.3-201ENST00000556041 767 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms