Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.46□□□□□ -0.25
SKP1P63208 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 TEKT4P2-202ENST00000559466 1312 ntBASIC13.46□□□□□ -0.25
SKP1P63208 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SKP1P63208 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.46□□□□□ -0.25
SKP1P63208 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.46□□□□□ -0.25
SKP1P63208 RTN3P1-201ENST00000536295 711 ntBASIC13.46□□□□□ -0.25
SKP1P63208 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SKP1P63208 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
SKP1P63208 AC242376.1-201ENST00000559033 726 ntBASIC13.46□□□□□ -0.25
SKP1P63208 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.46□□□□□ -0.25
SKP1P63208 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.46□□□□□ -0.25
SKP1P63208 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.46□□□□□ -0.25
SKP1P63208 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.46□□□□□ -0.25
SKP1P63208 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 BAP1-211ENST00000615113 489 ntBASIC13.46□□□□□ -0.25
SKP1P63208 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.46□□□□□ -0.25
SKP1P63208 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SKP1P63208 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.46□□□□□ -0.25
SKP1P63208 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SKP1P63208 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SKP1P63208 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SKP1P63208 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SKP1P63208 KRT8P31-201ENST00000504812 1408 ntBASIC13.46□□□□□ -0.26
SKP1P63208 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.46□□□□□ -0.26
SKP1P63208 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
SKP1P63208 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SKP1P63208 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SKP1P63208 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.46□□□□□ -0.26
SKP1P63208 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.46□□□□□ -0.26
SKP1P63208 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
SKP1P63208 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 AC004554.1-201ENST00000422830 1468 ntBASIC13.45□□□□□ -0.26
SKP1P63208 AC061965.1-201ENST00000560524 1465 ntBASIC13.45□□□□□ -0.26
SKP1P63208 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.45□□□□□ -0.26
SKP1P63208 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.45□□□□□ -0.26
SKP1P63208 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.45□□□□□ -0.26
SKP1P63208 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.45□□□□□ -0.26
SKP1P63208 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.45□□□□□ -0.26
SKP1P63208 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SKP1P63208 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms