Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
AP3S2P59780 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
AP3S2P59780 LINC00638-201ENST00000555578 2518 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 HERC2P9-206ENST00000529624 5187 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.17□□□□□ -0.46
AP3S2P59780 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.17□□□□□ -0.46
AP3S2P59780 IL9RP2-201ENST00000423948 1312 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 AC087499.5-201ENST00000452760 1342 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 RCC2P1-201ENST00000452257 1476 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 AC004461.1-201ENST00000412461 403 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.17□□□□□ -0.46
AP3S2P59780 AC114501.2-201ENST00000439631 535 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.17□□□□□ -0.46
AP3S2P59780 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.17□□□□□ -0.46
AP3S2P59780 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 AP001582.1-201ENST00000525856 295 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 SPDYE22P-201ENST00000582158 798 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.17□□□□□ -0.46
AP3S2P59780 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 AC004835.2-201ENST00000603762 682 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 AL138828.2-201ENST00000615812 383 ntBASIC12.17□□□□□ -0.46
AP3S2P59780 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
AP3S2P59780 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.17□□□□□ -0.46
AP3S2P59780 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.17□□□□□ -0.46
AP3S2P59780 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.17□□□□□ -0.46
AP3S2P59780 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S2P59780 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.16□□□□□ -0.46
AP3S2P59780 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 AL590824.1-201ENST00000403828 1349 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 HSPA8P9-201ENST00000485881 1943 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
AP3S2P59780 AL139400.1-201ENST00000366220 510 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 SNORA50C-201ENST00000408535 133 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.16□□□□□ -0.46
AP3S2P59780 KRT18P15-201ENST00000458108 1291 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 AP000344.2-201ENST00000512987 629 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.16□□□□□ -0.46
AP3S2P59780 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.16□□□□□ -0.46
AP3S2P59780 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.16□□□□□ -0.46
AP3S2P59780 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.16□□□□□ -0.46
AP3S2P59780 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 308.7 ms