Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CBX5P45973 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CBX5P45973 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CBX5P45973 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.29□□□□□ -0.44
CBX5P45973 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
CBX5P45973 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
CBX5P45973 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC12.29□□□□□ -0.44
CBX5P45973 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CBX5P45973 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.28□□□□□ -0.44
CBX5P45973 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CBX5P45973 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.28□□□□□ -0.44
CBX5P45973 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.28□□□□□ -0.44
CBX5P45973 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.28□□□□□ -0.44
CBX5P45973 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.28□□□□□ -0.44
CBX5P45973 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
CBX5P45973 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.28□□□□□ -0.44
CBX5P45973 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CBX5P45973 AC124283.3-201ENST00000570869 594 ntBASIC12.28□□□□□ -0.44
CBX5P45973 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.28□□□□□ -0.44
CBX5P45973 AC004466.1-201ENST00000599515 1080 ntBASIC12.28□□□□□ -0.44
CBX5P45973 AL671883.3-201ENST00000603274 991 ntBASIC12.28□□□□□ -0.44
CBX5P45973 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
CBX5P45973 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CBX5P45973 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.28□□□□□ -0.44
CBX5P45973 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.28□□□□□ -0.44
CBX5P45973 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 CICP1-201ENST00000416803 2410 ntBASIC12.28□□□□□ -0.44
CBX5P45973 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.28□□□□□ -0.44
CBX5P45973 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.28□□□□□ -0.44
CBX5P45973 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CBX5P45973 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC12.28□□□□□ -0.44
CBX5P45973 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CBX5P45973 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.27□□□□□ -0.44
CBX5P45973 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CBX5P45973 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.27□□□□□ -0.44
CBX5P45973 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CBX5P45973 AC015819.3-201ENST00000624305 2674 ntBASIC12.27□□□□□ -0.44
CBX5P45973 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CBX5P45973 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CBX5P45973 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CBX5P45973 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CBX5P45973 AC022144.1-201ENST00000602255 1580 ntBASIC12.27□□□□□ -0.44
CBX5P45973 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CBX5P45973 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.27□□□□□ -0.45
CBX5P45973 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CBX5P45973 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CBX5P45973 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CBX5P45973 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CBX5P45973 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
CBX5P45973 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CBX5P45973 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.27□□□□□ -0.45
CBX5P45973 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CBX5P45973 AC245100.3-201ENST00000441281 285 ntBASIC12.27□□□□□ -0.45
CBX5P45973 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.27□□□□□ -0.45
CBX5P45973 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.27□□□□□ -0.45
CBX5P45973 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms