Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL15A1P39059 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL15A1P39059 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.58■□□□□ 0.41
COL15A1P39059 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.58■□□□□ 0.41
COL15A1P39059 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL15A1P39059 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL15A1P39059 AC079250.1-201ENST00000456046 531 ntBASIC17.58■□□□□ 0.4
COL15A1P39059 BCRP4-201ENST00000506079 804 ntBASIC17.58■□□□□ 0.4
COL15A1P39059 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.58■□□□□ 0.4
COL15A1P39059 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.58■□□□□ 0.4
COL15A1P39059 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COL15A1P39059 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.58■□□□□ 0.4
COL15A1P39059 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COL15A1P39059 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.58■□□□□ 0.4
COL15A1P39059 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL15A1P39059 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.58■□□□□ 0.4
COL15A1P39059 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
COL15A1P39059 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC17.58■□□□□ 0.4
COL15A1P39059 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL15A1P39059 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.57■□□□□ 0.4
COL15A1P39059 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.57■□□□□ 0.4
COL15A1P39059 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL15A1P39059 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
COL15A1P39059 RNA5SP491-201ENST00000362936 118 ntBASIC17.57■□□□□ 0.4
COL15A1P39059 HLA-DMA-202ENST00000395303 1007 ntBASIC17.57■□□□□ 0.4
COL15A1P39059 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.57■□□□□ 0.4
COL15A1P39059 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 AC103563.1-201ENST00000429316 123 ntBASIC17.57■□□□□ 0.4
COL15A1P39059 AK2P2-201ENST00000439142 405 ntBASIC17.57■□□□□ 0.4
COL15A1P39059 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.57■□□□□ 0.4
COL15A1P39059 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC17.57■□□□□ 0.4
COL15A1P39059 FAM187B2P-201ENST00000577135 713 ntBASIC17.57■□□□□ 0.4
COL15A1P39059 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.57■□□□□ 0.4
COL15A1P39059 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.57■□□□□ 0.4
COL15A1P39059 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.57■□□□□ 0.4
COL15A1P39059 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.57■□□□□ 0.4
COL15A1P39059 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.57■□□□□ 0.4
COL15A1P39059 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.57■□□□□ 0.4
COL15A1P39059 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL15A1P39059 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
COL15A1P39059 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.57■□□□□ 0.4
COL15A1P39059 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.57■□□□□ 0.4
COL15A1P39059 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL15A1P39059 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL15A1P39059 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.56■□□□□ 0.4
COL15A1P39059 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.56■□□□□ 0.4
COL15A1P39059 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.56■□□□□ 0.4
COL15A1P39059 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COL15A1P39059 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COL15A1P39059 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COL15A1P39059 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.56■□□□□ 0.4
COL15A1P39059 AC136604.1-202ENST00000425471 771 ntBASIC17.56■□□□□ 0.4
COL15A1P39059 VDAC1P11-201ENST00000458323 852 ntBASIC17.56■□□□□ 0.4
COL15A1P39059 AC010531.8-201ENST00000623341 685 ntBASIC17.56■□□□□ 0.4
COL15A1P39059 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC17.56■□□□□ 0.4
COL15A1P39059 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
COL15A1P39059 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.56■□□□□ 0.4
COL15A1P39059 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.56■□□□□ 0.4
COL15A1P39059 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms