Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT9P35527 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT9P35527 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.52■□□□□ 0.08
KRT9P35527 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT9P35527 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT9P35527 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT9P35527 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 AL645933.1-201ENST00000440087 609 ntBASIC15.52■□□□□ 0.08
KRT9P35527 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT9P35527 KRT223P-202ENST00000449164 1292 ntBASIC15.52■□□□□ 0.08
KRT9P35527 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT9P35527 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.52■□□□□ 0.08
KRT9P35527 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 AL512310.5-201ENST00000551999 515 ntBASIC15.52■□□□□ 0.08
KRT9P35527 DUX4L45-201ENST00000566406 1057 ntBASIC15.52■□□□□ 0.08
KRT9P35527 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT9P35527 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT9P35527 MIR6720-201ENST00000611664 98 ntBASIC15.52■□□□□ 0.08
KRT9P35527 MIR6805-201ENST00000615055 62 ntBASIC15.52■□□□□ 0.08
KRT9P35527 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT9P35527 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
KRT9P35527 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT9P35527 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
KRT9P35527 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
KRT9P35527 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT9P35527 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT9P35527 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
KRT9P35527 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT9P35527 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT9P35527 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 MIR658-201ENST00000385210 100 ntBASIC15.51■□□□□ 0.07
KRT9P35527 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 FAM21FP-201ENST00000426241 1131 ntBASIC15.51■□□□□ 0.07
KRT9P35527 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
KRT9P35527 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.51■□□□□ 0.07
KRT9P35527 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.51■□□□□ 0.07
KRT9P35527 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
KRT9P35527 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 EEF1DP1-201ENST00000585891 896 ntBASIC15.51■□□□□ 0.07
KRT9P35527 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.51■□□□□ 0.07
KRT9P35527 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
KRT9P35527 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
KRT9P35527 AC061965.1-201ENST00000560524 1465 ntBASIC15.51■□□□□ 0.07
KRT9P35527 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
KRT9P35527 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT9P35527 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
KRT9P35527 CCT8L1P-201ENST00000465400 1674 ntBASIC15.51■□□□□ 0.07
KRT9P35527 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT9P35527 LINC00567-201ENST00000569854 3409 ntBASIC15.5■□□□□ 0.07
KRT9P35527 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
KRT9P35527 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms