Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.96□□□□□ -0.5
COL8A2P25067 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC11.95□□□□□ -0.5
COL8A2P25067 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.95□□□□□ -0.5
COL8A2P25067 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC11.95□□□□□ -0.5
COL8A2P25067 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC11.95□□□□□ -0.5
COL8A2P25067 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC11.95□□□□□ -0.5
COL8A2P25067 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC11.95□□□□□ -0.5
COL8A2P25067 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC11.95□□□□□ -0.5
COL8A2P25067 HERC2P11-201ENST00000562845 725 ntBASIC11.95□□□□□ -0.5
COL8A2P25067 NDUFB10P1-201ENST00000567319 521 ntBASIC11.95□□□□□ -0.5
COL8A2P25067 AC100756.2-201ENST00000569537 736 ntBASIC11.95□□□□□ -0.5
COL8A2P25067 MIR3180-2-201ENST00000581748 88 ntBASIC11.95□□□□□ -0.5
COL8A2P25067 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
COL8A2P25067 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC11.95□□□□□ -0.5
COL8A2P25067 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.95□□□□□ -0.5
COL8A2P25067 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
COL8A2P25067 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
COL8A2P25067 AC019294.4-201ENST00000561777 2905 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.94□□□□□ -0.5
COL8A2P25067 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
COL8A2P25067 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC11.94□□□□□ -0.5
COL8A2P25067 AC092978.1-202ENST00000637590 1327 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
COL8A2P25067 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
COL8A2P25067 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 RPSAP31-201ENST00000416648 895 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 AC079112.1-201ENST00000454972 939 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 AC104784.1-201ENST00000473096 294 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms