Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.66□□□□□ -0.22
COX4I1P13073 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.66□□□□□ -0.22
COX4I1P13073 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COX4I1P13073 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.66□□□□□ -0.22
COX4I1P13073 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COX4I1P13073 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
COX4I1P13073 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
COX4I1P13073 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COX4I1P13073 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COX4I1P13073 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.65□□□□□ -0.22
COX4I1P13073 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
COX4I1P13073 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.65□□□□□ -0.22
COX4I1P13073 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.65□□□□□ -0.22
COX4I1P13073 AL162726.2-201ENST00000438986 1017 ntBASIC13.65□□□□□ -0.22
COX4I1P13073 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 AP003171.2-201ENST00000528208 925 ntBASIC13.65□□□□□ -0.22
COX4I1P13073 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.65□□□□□ -0.22
COX4I1P13073 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.65□□□□□ -0.22
COX4I1P13073 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COX4I1P13073 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.65□□□□□ -0.22
COX4I1P13073 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
COX4I1P13073 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
COX4I1P13073 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.65□□□□□ -0.22
COX4I1P13073 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COX4I1P13073 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.65□□□□□ -0.22
COX4I1P13073 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
COX4I1P13073 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.64□□□□□ -0.23
COX4I1P13073 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.64□□□□□ -0.23
COX4I1P13073 MARK2P16-201ENST00000605714 1723 ntBASIC13.64□□□□□ -0.23
COX4I1P13073 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.64□□□□□ -0.23
COX4I1P13073 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COX4I1P13073 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.64□□□□□ -0.23
COX4I1P13073 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 CD8B2-202ENST00000417670 633 ntBASIC13.64□□□□□ -0.23
COX4I1P13073 ST13P19-201ENST00000442505 1124 ntBASIC13.64□□□□□ -0.23
COX4I1P13073 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.64□□□□□ -0.23
COX4I1P13073 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.64□□□□□ -0.23
COX4I1P13073 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.64□□□□□ -0.23
COX4I1P13073 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.64□□□□□ -0.23
COX4I1P13073 OR10B1P-201ENST00000601666 907 ntBASIC13.64□□□□□ -0.23
COX4I1P13073 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.64□□□□□ -0.23
COX4I1P13073 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.64□□□□□ -0.23
COX4I1P13073 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COX4I1P13073 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms