Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 LINC00638-201ENST00000555578 2518 ntBASIC16.2■□□□□ 0.18
TPM2P07951 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TPM2P07951 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM2P07951 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM2P07951 AC112176.1-201ENST00000565428 3024 ntBASIC16.2■□□□□ 0.18
TPM2P07951 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM2P07951 AC115284.2-201ENST00000624646 2054 ntBASIC16.2■□□□□ 0.18
TPM2P07951 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TPM2P07951 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM2P07951 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC16.2■□□□□ 0.18
TPM2P07951 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TPM2P07951 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM2P07951 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TPM2P07951 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC16.19■□□□□ 0.18
TPM2P07951 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC16.19■□□□□ 0.18
TPM2P07951 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.19■□□□□ 0.18
TPM2P07951 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.19■□□□□ 0.18
TPM2P07951 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM2P07951 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC16.19■□□□□ 0.18
TPM2P07951 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 GHET1-201ENST00000627071 1906 ntBASIC16.19■□□□□ 0.18
TPM2P07951 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.19■□□□□ 0.18
TPM2P07951 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TPM2P07951 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM2P07951 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM2P07951 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 AC139712.1-201ENST00000378256 1875 ntBASIC16.18■□□□□ 0.18
TPM2P07951 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 AC098850.1-201ENST00000419919 790 ntBASIC16.18■□□□□ 0.18
TPM2P07951 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 SERBP1P5-201ENST00000510079 1181 ntBASIC16.18■□□□□ 0.18
TPM2P07951 CLUHP6-201ENST00000580789 941 ntBASIC16.18■□□□□ 0.18
TPM2P07951 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM2P07951 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM2P07951 AC004466.1-201ENST00000599515 1080 ntBASIC16.18■□□□□ 0.18
TPM2P07951 AC138696.2-201ENST00000607376 223 ntBASIC16.18■□□□□ 0.18
TPM2P07951 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TPM2P07951 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM2P07951 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM2P07951 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM2P07951 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM2P07951 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 PCDHA6-201ENST00000378126 3267 ntBASIC16.18■□□□□ 0.18
TPM2P07951 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TPM2P07951 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM2P07951 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms