Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RETP07949 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
RETP07949 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.25□□□□□ -0.13
RETP07949 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
RETP07949 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RETP07949 KRT18P46-201ENST00000435568 1279 ntBASIC14.25□□□□□ -0.13
RETP07949 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.25□□□□□ -0.13
RETP07949 AL451000.1-201ENST00000451300 1186 ntBASIC14.25□□□□□ -0.13
RETP07949 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.25□□□□□ -0.13
RETP07949 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 AC023906.1-201ENST00000486386 453 ntBASIC14.25□□□□□ -0.13
RETP07949 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.25□□□□□ -0.13
RETP07949 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.25□□□□□ -0.13
RETP07949 AC022447.6-201ENST00000515522 438 ntBASIC14.25□□□□□ -0.13
RETP07949 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.25□□□□□ -0.13
RETP07949 AC090136.2-201ENST00000517809 420 ntBASIC14.25□□□□□ -0.13
RETP07949 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.25□□□□□ -0.13
RETP07949 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.25□□□□□ -0.13
RETP07949 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RETP07949 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.25□□□□□ -0.13
RETP07949 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.25□□□□□ -0.13
RETP07949 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RETP07949 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.25□□□□□ -0.13
RETP07949 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RETP07949 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RETP07949 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RETP07949 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RETP07949 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.24□□□□□ -0.13
RETP07949 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RETP07949 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RETP07949 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.24□□□□□ -0.13
RETP07949 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RETP07949 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
RETP07949 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RETP07949 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.24□□□□□ -0.13
RETP07949 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.24□□□□□ -0.13
RETP07949 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RETP07949 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RETP07949 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.24□□□□□ -0.13
RETP07949 AC108734.2-201ENST00000420887 1069 ntBASIC14.24□□□□□ -0.13
RETP07949 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.24□□□□□ -0.13
RETP07949 RN7SL767P-201ENST00000493013 295 ntBASIC14.24□□□□□ -0.13
RETP07949 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.24□□□□□ -0.13
RETP07949 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.24□□□□□ -0.13
RETP07949 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
RETP07949 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.24□□□□□ -0.13
RETP07949 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RETP07949 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.24□□□□□ -0.13
RETP07949 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.24□□□□□ -0.13
RETP07949 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RETP07949 AC067750.1-201ENST00000608826 6545 ntBASIC14.24□□□□□ -0.13
RETP07949 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms