Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TPM3P06753 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 AC073869.1-201ENST00000415574 2762 ntBASIC15.92■□□□□ 0.14
TPM3P06753 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM3P06753 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM3P06753 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM3P06753 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM3P06753 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM3P06753 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 AC093433.1-201ENST00000458048 571 ntBASIC15.92■□□□□ 0.14
TPM3P06753 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM3P06753 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM3P06753 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM3P06753 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.92■□□□□ 0.14
TPM3P06753 AP001160.2-201ENST00000596071 487 ntBASIC15.92■□□□□ 0.14
TPM3P06753 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.92■□□□□ 0.14
TPM3P06753 AC009118.2-201ENST00000613275 655 ntBASIC15.92■□□□□ 0.14
TPM3P06753 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TPM3P06753 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
TPM3P06753 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM3P06753 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM3P06753 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 AC110048.1-201ENST00000604293 2157 ntBASIC15.92■□□□□ 0.14
TPM3P06753 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 AC108024.1-201ENST00000626286 1721 ntBASIC15.91■□□□□ 0.14
TPM3P06753 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM3P06753 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TPM3P06753 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TPM3P06753 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM3P06753 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.91■□□□□ 0.14
TPM3P06753 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 AL391280.1-201ENST00000506969 1062 ntBASIC15.91■□□□□ 0.14
TPM3P06753 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TPM3P06753 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.91■□□□□ 0.14
TPM3P06753 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM3P06753 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TPM3P06753 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM3P06753 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TPM3P06753 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 AP003969.2-201ENST00000623739 2275 ntBASIC15.91■□□□□ 0.14
TPM3P06753 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM3P06753 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM3P06753 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
TPM3P06753 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
TPM3P06753 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TPM3P06753 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TPM3P06753 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM3P06753 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TPM3P06753 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.9■□□□□ 0.14
TPM3P06753 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.9■□□□□ 0.14
TPM3P06753 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms