Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.9□□□□□ -0.5
CD74P04233 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.9□□□□□ -0.5
CD74P04233 AOC4P-203ENST00000566825 2289 ntBASIC11.9□□□□□ -0.5
CD74P04233 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CD74P04233 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CD74P04233 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.9□□□□□ -0.5
CD74P04233 MRPS18AP1-201ENST00000414458 589 ntBASIC11.9□□□□□ -0.5
CD74P04233 AC098850.1-201ENST00000419919 790 ntBASIC11.9□□□□□ -0.5
CD74P04233 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.9□□□□□ -0.5
CD74P04233 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.9□□□□□ -0.5
CD74P04233 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.9□□□□□ -0.5
CD74P04233 AP003171.2-201ENST00000528208 925 ntBASIC11.9□□□□□ -0.5
CD74P04233 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.9□□□□□ -0.5
CD74P04233 AC123567.1-201ENST00000548294 1261 ntBASIC11.9□□□□□ -0.5
CD74P04233 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
CD74P04233 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.9□□□□□ -0.5
CD74P04233 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.9□□□□□ -0.5
CD74P04233 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.9□□□□□ -0.5
CD74P04233 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.9□□□□□ -0.5
CD74P04233 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CD74P04233 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD74P04233 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
CD74P04233 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.9□□□□□ -0.5
CD74P04233 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD74P04233 FAM90A11P-201ENST00000518378 2218 ntBASIC11.9□□□□□ -0.51
CD74P04233 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD74P04233 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
CD74P04233 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD74P04233 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.9□□□□□ -0.51
CD74P04233 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.9□□□□□ -0.51
CD74P04233 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD74P04233 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.89□□□□□ -0.51
CD74P04233 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 CD8B2-202ENST00000417670 633 ntBASIC11.89□□□□□ -0.51
CD74P04233 PMS2P2-201ENST00000425039 1128 ntBASIC11.89□□□□□ -0.51
CD74P04233 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 AL162726.2-201ENST00000438986 1017 ntBASIC11.89□□□□□ -0.51
CD74P04233 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.89□□□□□ -0.51
CD74P04233 DNAJB3-202ENST00000449667 1266 ntBASIC11.89□□□□□ -0.51
CD74P04233 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 MIR4683-201ENST00000579659 81 ntBASIC11.89□□□□□ -0.51
CD74P04233 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms