Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CCDC187A0A096LP49 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CCDC187A0A096LP49 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCDC187A0A096LP49 FKBP4P8-201ENST00000610931 1369 ntBASIC13.33□□□□□ -0.27
CCDC187A0A096LP49 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.33□□□□□ -0.27
CCDC187A0A096LP49 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.33□□□□□ -0.27
CCDC187A0A096LP49 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 PTGER4P2-201ENST00000328411 252 ntBASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 ACTBP14-201ENST00000411655 1089 ntBASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 FAM21EP-201ENST00000417804 985 ntBASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 PTGER4P3-201ENST00000458150 252 ntBASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 EIF5AP2-201ENST00000585668 1047 ntBASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 TYMSP2-201ENST00000589501 424 ntBASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC187A0A096LP49 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 AC117503.4-201ENST00000623229 1418 ntBASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 RPL3P5-201ENST00000441645 1232 ntBASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 RN7SL288P-201ENST00000490496 291 ntBASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms