Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA5Q9Y5G8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA5Q9Y5G8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHGA5Q9Y5G8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 AC080038.1-201ENST00000611274 1154 ntBASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA5Q9Y5G8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA5Q9Y5G8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA5Q9Y5G8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 AC006015.1-201ENST00000429970 570 ntBASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA5Q9Y5G8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA5Q9Y5G8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 AC133637.1-201ENST00000624115 1537 ntBASIC22.26■■□□□ 1.15
PCDHGA5Q9Y5G8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGA5Q9Y5G8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 RAP2CP1-201ENST00000605103 478 ntBASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGA5Q9Y5G8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms