Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC007029.1-201ENST00000604183 313 ntBASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 AC012354.3-201ENST00000623734 483 ntBASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 AL161729.1-201ENST00000604104 1402 ntBASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB1Q9Y5G3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGB1Q9Y5G3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHGB1Q9Y5G3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHGB1Q9Y5G3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB1Q9Y5G3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB1Q9Y5G3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB1Q9Y5G3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB1Q9Y5G3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 RAP2CP1-202ENST00000605179 643 ntBASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 AC022413.1-201ENST00000624602 984 ntBASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGB1Q9Y5G3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGB1Q9Y5G3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.52■□□□□ 0.87
PCDHGB1Q9Y5G3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGB1Q9Y5G3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB1Q9Y5G3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 AC026202.3-201ENST00000600805 1127 ntBASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
PCDHGB1Q9Y5G3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 C11orf96-202ENST00000528572 1834 ntBASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGB1Q9Y5G3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB1Q9Y5G3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms