Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 AC021242.3-201ENST00000607598 1377 ntBASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB3Q9Y5G1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 ANOS2P-203ENST00000472227 1816 ntBASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB3Q9Y5G1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 ALDH1A3-203ENST00000557963 1670 ntBASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB3Q9Y5G1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB3Q9Y5G1 AC233723.2-201ENST00000623798 2106 ntBASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 AC004448.1-201ENST00000458332 883 ntBASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 AC131212.1-201ENST00000613771 668 ntBASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB3Q9Y5G1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 AC092068.2-201ENST00000590491 1708 ntBASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB3Q9Y5G1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 DUSP8P3-201ENST00000399571 1760 ntBASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB3Q9Y5G1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB3Q9Y5G1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB3Q9Y5G1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGB3Q9Y5G1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB3Q9Y5G1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGB3Q9Y5G1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms