Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 AP001330.3-201ENST00000520123 633 ntBASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 pRNA.6-201ENST00000610482 90 ntBASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 pRNA.5-201ENST00000612139 90 ntBASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 pRNA.11-201ENST00000618423 90 ntBASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 pRNA.13-201ENST00000619112 90 ntBASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 AL136967.2-201ENST00000623968 743 ntBASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 AC004812.2-201ENST00000611079 2094 ntBASIC15.44■□□□□ 0.06
LINC00588Q9Y4M8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 MIR939-201ENST00000401314 82 ntBASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 AC136469.2-201ENST00000623944 1028 ntBASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LINC00588Q9Y4M8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC00588Q9Y4M8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 ZNRF2P3-201ENST00000424200 374 ntBASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 AC008764.7-201ENST00000593779 1081 ntBASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00588Q9Y4M8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 AC091305.1-201ENST00000479476 895 ntBASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 AC027682.1-201ENST00000562846 899 ntBASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
LINC00588Q9Y4M8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 AC105265.2-201ENST00000467189 838 ntBASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00588Q9Y4M8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LINC00588Q9Y4M8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LINC00588Q9Y4M8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00588Q9Y4M8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms