Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COMMD3Q9UBI1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 AL157400.5-201ENST00000507624 621 ntBASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COMMD3Q9UBI1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.71■□□□□ 0.75
COMMD3Q9UBI1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 C11orf96-202ENST00000528572 1834 ntBASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3Q9UBI1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 AL161729.1-201ENST00000604104 1402 ntBASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.69■□□□□ 0.74
COMMD3Q9UBI1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 SMPD5-203ENST00000639008 1464 ntBASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.68■□□□□ 0.74
COMMD3Q9UBI1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 AC092053.2-201ENST00000640557 1818 ntBASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 FBXW4P1-201ENST00000426721 2239 ntBASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3Q9UBI1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms