Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
PPP4R2Q9NY27 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.89■■■□□ 2.22
PPP4R2Q9NY27 AC092053.2-201ENST00000640557 1818 ntBASIC28.89■■■□□ 2.22
PPP4R2Q9NY27 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.88■■■□□ 2.21
PPP4R2Q9NY27 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.87■■■□□ 2.21
PPP4R2Q9NY27 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PPP4R2Q9NY27 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PPP4R2Q9NY27 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
PPP4R2Q9NY27 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PPP4R2Q9NY27 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.87■■■□□ 2.21
PPP4R2Q9NY27 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PPP4R2Q9NY27 ALDH1A3-203ENST00000557963 1670 ntBASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R2Q9NY27 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PPP4R2Q9NY27 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PPP4R2Q9NY27 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
PPP4R2Q9NY27 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC28.85■■■□□ 2.21
PPP4R2Q9NY27 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.85■■■□□ 2.21
PPP4R2Q9NY27 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.85■■■□□ 2.21
PPP4R2Q9NY27 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PPP4R2Q9NY27 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
PPP4R2Q9NY27 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PPP4R2Q9NY27 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC28.84■■■□□ 2.21
PPP4R2Q9NY27 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC28.84■■■□□ 2.21
PPP4R2Q9NY27 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PPP4R2Q9NY27 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.83■■■□□ 2.21
PPP4R2Q9NY27 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC28.82■■■□□ 2.2
PPP4R2Q9NY27 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R2Q9NY27 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 FBXW4P1-201ENST00000426721 2239 ntBASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.8■■■□□ 2.2
PPP4R2Q9NY27 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 AC079630.1-202ENST00000618127 1840 ntBASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 AC022413.1-201ENST00000624602 984 ntBASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R2Q9NY27 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms