Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 AC012354.3-201ENST00000623734 483 ntBASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD1Q9NXG2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.1■□□□□ 0.97
THUMPD1Q9NXG2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 LINC00565-201ENST00000562710 2331 ntBASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.09■□□□□ 0.97
THUMPD1Q9NXG2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
THUMPD1Q9NXG2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THUMPD1Q9NXG2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
THUMPD1Q9NXG2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
THUMPD1Q9NXG2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
THUMPD1Q9NXG2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD1Q9NXG2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD1Q9NXG2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.04■□□□□ 0.96
THUMPD1Q9NXG2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 YBX1P4-201ENST00000392794 808 ntBASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 GUSBP5-202ENST00000510805 1989 ntBASIC21.03■□□□□ 0.96
THUMPD1Q9NXG2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.02■□□□□ 0.96
THUMPD1Q9NXG2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms