Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
C12orf4Q9NQ89 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.36■□□□□ 0.69
C12orf4Q9NQ89 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
C12orf4Q9NQ89 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 AC090877.2-201ENST00000558441 1738 ntBASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 AC018755.3-202ENST00000596210 929 ntBASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf4Q9NQ89 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf4Q9NQ89 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C12orf4Q9NQ89 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
C12orf4Q9NQ89 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
C12orf4Q9NQ89 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 AL161729.1-201ENST00000604104 1402 ntBASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
C12orf4Q9NQ89 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 RNF126P1-201ENST00000567452 1320 ntBASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
C12orf4Q9NQ89 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
C12orf4Q9NQ89 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 AL592295.1-201ENST00000400984 884 ntBASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf4Q9NQ89 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf4Q9NQ89 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms