Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 AC144652.1-201ENST00000609974 1624 ntBASIC26.58■■□□□ 1.85
RNF41Q9H4P4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
RNF41Q9H4P4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.57■■□□□ 1.84
RNF41Q9H4P4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
RNF41Q9H4P4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
RNF41Q9H4P4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
RNF41Q9H4P4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.55■■□□□ 1.84
RNF41Q9H4P4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.55■■□□□ 1.84
RNF41Q9H4P4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.55■■□□□ 1.84
RNF41Q9H4P4 AC099791.2-201ENST00000605725 427 ntBASIC26.55■■□□□ 1.84
RNF41Q9H4P4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.55■■□□□ 1.84
RNF41Q9H4P4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.55■■□□□ 1.84
RNF41Q9H4P4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.54■■□□□ 1.84
RNF41Q9H4P4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF41Q9H4P4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.54■■□□□ 1.84
RNF41Q9H4P4 AC079630.1-202ENST00000618127 1840 ntBASIC26.54■■□□□ 1.84
RNF41Q9H4P4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.54■■□□□ 1.84
RNF41Q9H4P4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.54■■□□□ 1.84
RNF41Q9H4P4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF41Q9H4P4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF41Q9H4P4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 DUX4L19-201ENST00000557448 1267 ntBASIC26.53■■□□□ 1.84
RNF41Q9H4P4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF41Q9H4P4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
RNF41Q9H4P4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF41Q9H4P4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF41Q9H4P4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF41Q9H4P4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF41Q9H4P4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RNF41Q9H4P4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RNF41Q9H4P4 AC009086.3-201ENST00000623486 1008 ntBASIC26.52■■□□□ 1.84
RNF41Q9H4P4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 ANOS2P-203ENST00000472227 1816 ntBASIC26.51■■□□□ 1.83
RNF41Q9H4P4 LINC01529-204ENST00000636474 1715 ntBASIC26.51■■□□□ 1.83
RNF41Q9H4P4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.51■■□□□ 1.83
RNF41Q9H4P4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 DUX4L4-201ENST00000566884 1269 ntBASIC26.5■■□□□ 1.83
RNF41Q9H4P4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
RNF41Q9H4P4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 AC092068.2-201ENST00000590491 1708 ntBASIC26.49■■□□□ 1.83
RNF41Q9H4P4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF41Q9H4P4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.48■■□□□ 1.83
RNF41Q9H4P4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF41Q9H4P4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF41Q9H4P4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RNF41Q9H4P4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF41Q9H4P4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RNF41Q9H4P4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.48■■□□□ 1.83
RNF41Q9H4P4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF41Q9H4P4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
RNF41Q9H4P4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms