Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.73■■□□□ 1.07
TUBB1Q9H4B7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.73■■□□□ 1.07
TUBB1Q9H4B7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB1Q9H4B7 LINC00565-201ENST00000562710 2331 ntBASIC21.73■■□□□ 1.07
TUBB1Q9H4B7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB1Q9H4B7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB1Q9H4B7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB1Q9H4B7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 CLDN5-201ENST00000403084 2357 ntBASIC21.72■■□□□ 1.07
TUBB1Q9H4B7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 LINC00526-201ENST00000581067 1875 ntBASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB1Q9H4B7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.7■■□□□ 1.07
TUBB1Q9H4B7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.7■■□□□ 1.07
TUBB1Q9H4B7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TUBB1Q9H4B7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 MIR4508-201ENST00000584178 70 ntBASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.69■■□□□ 1.06
TUBB1Q9H4B7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 AC103834.1-201ENST00000520383 144 ntBASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.68■■□□□ 1.06
TUBB1Q9H4B7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 AL353803.4-201ENST00000565882 1934 ntBASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB1Q9H4B7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB1Q9H4B7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms