Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ALX4Q9H161 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALX4Q9H161 MIR3960-201ENST00000583311 91 ntBASIC18.96■□□□□ 0.63
ALX4Q9H161 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.96■□□□□ 0.63
ALX4Q9H161 NTF6A-201ENST00000591175 560 ntBASIC18.96■□□□□ 0.63
ALX4Q9H161 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ALX4Q9H161 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
ALX4Q9H161 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ALX4Q9H161 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ALX4Q9H161 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 C11orf96-202ENST00000528572 1834 ntBASIC18.95■□□□□ 0.62
ALX4Q9H161 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.95■□□□□ 0.62
ALX4Q9H161 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.95■□□□□ 0.62
ALX4Q9H161 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.95■□□□□ 0.62
ALX4Q9H161 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ALX4Q9H161 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 AC092053.2-201ENST00000640557 1818 ntBASIC18.95■□□□□ 0.62
ALX4Q9H161 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
ALX4Q9H161 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALX4Q9H161 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.95■□□□□ 0.62
ALX4Q9H161 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.94■□□□□ 0.62
ALX4Q9H161 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.94■□□□□ 0.62
ALX4Q9H161 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALX4Q9H161 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ALX4Q9H161 RP9P-202ENST00000450133 1212 ntBASIC18.94■□□□□ 0.62
ALX4Q9H161 AC093536.1-201ENST00000569153 554 ntBASIC18.94■□□□□ 0.62
ALX4Q9H161 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALX4Q9H161 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.94■□□□□ 0.62
ALX4Q9H161 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
ALX4Q9H161 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.93■□□□□ 0.62
ALX4Q9H161 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ALX4Q9H161 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ALX4Q9H161 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ALX4Q9H161 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALX4Q9H161 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.93■□□□□ 0.62
ALX4Q9H161 AC009831.1-201ENST00000580420 1582 ntBASIC18.93■□□□□ 0.62
ALX4Q9H161 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ALX4Q9H161 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ALX4Q9H161 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.93■□□□□ 0.62
ALX4Q9H161 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.92■□□□□ 0.62
ALX4Q9H161 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.92■□□□□ 0.62
ALX4Q9H161 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ALX4Q9H161 AC133552.2-201ENST00000619106 1032 ntBASIC18.92■□□□□ 0.62
ALX4Q9H161 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ALX4Q9H161 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALX4Q9H161 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALX4Q9H161 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.91■□□□□ 0.62
ALX4Q9H161 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALX4Q9H161 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ALX4Q9H161 AC026202.3-201ENST00000600805 1127 ntBASIC18.91■□□□□ 0.62
ALX4Q9H161 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ALX4Q9H161 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALX4Q9H161 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALX4Q9H161 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.91■□□□□ 0.62
ALX4Q9H161 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALX4Q9H161 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALX4Q9H161 AC139530.1-201ENST00000575312 1977 ntBASIC18.9■□□□□ 0.62
ALX4Q9H161 KRT18P10-201ENST00000388836 1287 ntBASIC18.9■□□□□ 0.62
ALX4Q9H161 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.9■□□□□ 0.62
ALX4Q9H161 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALX4Q9H161 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALX4Q9H161 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALX4Q9H161 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALX4Q9H161 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALX4Q9H161 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.9■□□□□ 0.62
ALX4Q9H161 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.89■□□□□ 0.62
ALX4Q9H161 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.89■□□□□ 0.62
ALX4Q9H161 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.89■□□□□ 0.62
ALX4Q9H161 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.89■□□□□ 0.62
ALX4Q9H161 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.89■□□□□ 0.62
ALX4Q9H161 KRT18P60-201ENST00000312876 1297 ntBASIC18.89■□□□□ 0.61
ALX4Q9H161 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.89■□□□□ 0.61
ALX4Q9H161 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALX4Q9H161 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALX4Q9H161 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.89■□□□□ 0.61
ALX4Q9H161 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALX4Q9H161 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALX4Q9H161 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.89■□□□□ 0.61
ALX4Q9H161 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms