Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.55■■□□□ 1.2
CLPBQ9H078 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.55■■□□□ 1.2
CLPBQ9H078 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CLPBQ9H078 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLPBQ9H078 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CLPBQ9H078 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLPBQ9H078 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.54■■□□□ 1.2
CLPBQ9H078 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CLPBQ9H078 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.54■■□□□ 1.2
CLPBQ9H078 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLPBQ9H078 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLPBQ9H078 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLPBQ9H078 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLPBQ9H078 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.54■■□□□ 1.2
CLPBQ9H078 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.54■■□□□ 1.2
CLPBQ9H078 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLPBQ9H078 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLPBQ9H078 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.53■■□□□ 1.2
CLPBQ9H078 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.53■■□□□ 1.2
CLPBQ9H078 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLPBQ9H078 AC133561.4-201ENST00000566112 224 ntBASIC22.53■■□□□ 1.2
CLPBQ9H078 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.53■■□□□ 1.2
CLPBQ9H078 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLPBQ9H078 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CLPBQ9H078 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CLPBQ9H078 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
CLPBQ9H078 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLPBQ9H078 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLPBQ9H078 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLPBQ9H078 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CLPBQ9H078 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLPBQ9H078 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.51■■□□□ 1.19
CLPBQ9H078 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CLPBQ9H078 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CLPBQ9H078 UNC93B3-201ENST00000308076 687 ntBASIC22.51■■□□□ 1.19
CLPBQ9H078 SRD5A1P1-201ENST00000442297 786 ntBASIC22.51■■□□□ 1.19
CLPBQ9H078 PBX2P1-201ENST00000493219 1291 ntBASIC22.51■■□□□ 1.19
CLPBQ9H078 AC106739.1-201ENST00000617035 715 ntBASIC22.51■■□□□ 1.19
CLPBQ9H078 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CLPBQ9H078 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLPBQ9H078 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CLPBQ9H078 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.51■■□□□ 1.19
CLPBQ9H078 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLPBQ9H078 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLPBQ9H078 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLPBQ9H078 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLPBQ9H078 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLPBQ9H078 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLPBQ9H078 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLPBQ9H078 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CLPBQ9H078 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.5■■□□□ 1.19
CLPBQ9H078 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLPBQ9H078 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLPBQ9H078 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.49■■□□□ 1.19
CLPBQ9H078 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLPBQ9H078 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLPBQ9H078 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.49■■□□□ 1.19
CLPBQ9H078 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLPBQ9H078 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLPBQ9H078 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLPBQ9H078 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLPBQ9H078 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLPBQ9H078 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLPBQ9H078 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CLPBQ9H078 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLPBQ9H078 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLPBQ9H078 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLPBQ9H078 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLPBQ9H078 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLPBQ9H078 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.47■■□□□ 1.19
CLPBQ9H078 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CLPBQ9H078 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLPBQ9H078 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.47■■□□□ 1.19
CLPBQ9H078 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.47■■□□□ 1.19
CLPBQ9H078 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.47■■□□□ 1.19
CLPBQ9H078 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.47■■□□□ 1.19
CLPBQ9H078 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CLPBQ9H078 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLPBQ9H078 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLPBQ9H078 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLPBQ9H078 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.46■■□□□ 1.19
CLPBQ9H078 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CLPBQ9H078 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.46■■□□□ 1.19
CLPBQ9H078 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.46■■□□□ 1.19
CLPBQ9H078 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLPBQ9H078 AL136162.1-201ENST00000607711 1078 ntBASIC22.46■■□□□ 1.19
CLPBQ9H078 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLPBQ9H078 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CLPBQ9H078 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLPBQ9H078 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CLPBQ9H078 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
CLPBQ9H078 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms