Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 YBX1P4-201ENST00000392794 808 ntBASIC13.27□□□□□ -0.29
LIMD2Q9BT23 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 ABCB10P4-201ENST00000566803 2184 ntBASIC13.27□□□□□ -0.29
LIMD2Q9BT23 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 GUK1-208ENST00000366728 842 ntTSL 2 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 CD37-213ENST00000598095 1598 ntTSL 2 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.26□□□□□ -0.29
LIMD2Q9BT23 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 KRT18P24-201ENST00000344739 1156 ntBASIC13.25□□□□□ -0.29
LIMD2Q9BT23 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 SHD-204ENST00000599689 1729 ntTSL 5 BASIC13.25□□□□□ -0.29
LIMD2Q9BT23 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIMD2Q9BT23 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 AC120024.1-201ENST00000562672 995 ntBASIC13.23□□□□□ -0.29
LIMD2Q9BT23 MIR4508-201ENST00000584178 70 ntBASIC13.23□□□□□ -0.29
LIMD2Q9BT23 LSM7-203ENST00000585409 512 ntTSL 2 BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 AC010980.1-201ENST00000587192 1142 ntBASIC13.23□□□□□ -0.29
LIMD2Q9BT23 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIMD2Q9BT23 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LIMD2Q9BT23 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms