Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDHD3Q9BSH5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 AC079630.1-202ENST00000618127 1840 ntBASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 LINC00526-201ENST00000581067 1875 ntBASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 AC120024.1-201ENST00000562672 995 ntBASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 AC019171.1-201ENST00000601251 1056 ntBASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDHD3Q9BSH5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 AC022616.5-201ENST00000518796 181 ntBASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.94■□□□□ 0.62
HDHD3Q9BSH5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 AF131216.4-201ENST00000638924 1588 ntBASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.93■□□□□ 0.62
HDHD3Q9BSH5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDHD3Q9BSH5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDHD3Q9BSH5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.92■□□□□ 0.62
HDHD3Q9BSH5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.92■□□□□ 0.62
HDHD3Q9BSH5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HDHD3Q9BSH5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDHD3Q9BSH5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HDHD3Q9BSH5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
HDHD3Q9BSH5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 ABHD17AP5-201ENST00000580133 923 ntBASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 NTF6A-201ENST00000591175 560 ntBASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 BHLHE23-202ENST00000612929 1109 ntBASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 PVT1_1.1-201ENST00000615125 194 ntBASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 ECEL1P1-201ENST00000373592 1742 ntBASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.9■□□□□ 0.62
HDHD3Q9BSH5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HDHD3Q9BSH5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDHD3Q9BSH5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 MIR4281-201ENST00000580852 62 ntBASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms