Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AL590326.2-201ENST00000625139 305 ntBASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 TMPOP1-202ENST00000424642 1267 ntBASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SYNE2Q8WXH0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 KRT18P11-201ENST00000435214 1283 ntBASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 PRKY-204ENST00000533551 1019 ntBASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 AC006058.3-201ENST00000606217 1069 ntBASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC9.4□□□□□ -0.9
SYNE2Q8WXH0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 ADM-205ENST00000528544 586 ntTSL 2 BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SYNE2Q8WXH0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 AC097493.4-201ENST00000641197 219 ntBASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 AC133041.1-202ENST00000642053 222 ntBASIC9.39□□□□□ -0.91
SYNE2Q8WXH0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 GPALPP1-207ENST00000611650 899 ntBASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 pRNA.6-201ENST00000610482 90 ntBASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 pRNA.5-201ENST00000612139 90 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms