Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF138Q8WVD3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
RNF138Q8WVD3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.48■□□□□ 0.87
RNF138Q8WVD3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 AC099791.2-201ENST00000605725 427 ntBASIC20.47■□□□□ 0.87
RNF138Q8WVD3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF138Q8WVD3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 AC092171.4-201ENST00000609130 632 ntBASIC20.46■□□□□ 0.87
RNF138Q8WVD3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF138Q8WVD3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RNF138Q8WVD3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 LINC01529-204ENST00000636474 1715 ntBASIC20.45■□□□□ 0.86
RNF138Q8WVD3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 AC006455.2-201ENST00000429931 906 ntBASIC20.45■□□□□ 0.86
RNF138Q8WVD3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF138Q8WVD3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 AL499627.2-201ENST00000606283 725 ntBASIC20.44■□□□□ 0.86
RNF138Q8WVD3 AC009086.3-201ENST00000623486 1008 ntBASIC20.44■□□□□ 0.86
RNF138Q8WVD3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF138Q8WVD3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 DUX4L19-201ENST00000557448 1267 ntBASIC20.43■□□□□ 0.86
RNF138Q8WVD3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 AL138724.1-201ENST00000606771 1088 ntBASIC20.43■□□□□ 0.86
RNF138Q8WVD3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF138Q8WVD3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RNF138Q8WVD3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF138Q8WVD3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF138Q8WVD3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF138Q8WVD3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms