Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC131281.2-201ENST00000520478 145 ntBASIC23.95■■□□□ 1.42
TTC39CQ8N584 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.95■■□□□ 1.42
TTC39CQ8N584 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
TTC39CQ8N584 AC092171.4-201ENST00000609130 632 ntBASIC23.95■■□□□ 1.42
TTC39CQ8N584 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.95■■□□□ 1.42
TTC39CQ8N584 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
TTC39CQ8N584 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC39CQ8N584 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
TTC39CQ8N584 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39CQ8N584 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39CQ8N584 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39CQ8N584 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.94■■□□□ 1.42
TTC39CQ8N584 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39CQ8N584 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TTC39CQ8N584 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.93■■□□□ 1.42
TTC39CQ8N584 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.93■■□□□ 1.42
TTC39CQ8N584 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.93■■□□□ 1.42
TTC39CQ8N584 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.93■■□□□ 1.42
TTC39CQ8N584 AC079630.1-202ENST00000618127 1840 ntBASIC23.93■■□□□ 1.42
TTC39CQ8N584 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TTC39CQ8N584 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.93■■□□□ 1.42
TTC39CQ8N584 LINC01529-204ENST00000636474 1715 ntBASIC23.93■■□□□ 1.42
TTC39CQ8N584 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39CQ8N584 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.92■■□□□ 1.42
TTC39CQ8N584 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TTC39CQ8N584 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39CQ8N584 DUX4L4-201ENST00000566884 1269 ntBASIC23.92■■□□□ 1.42
TTC39CQ8N584 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39CQ8N584 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39CQ8N584 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.92■■□□□ 1.42
TTC39CQ8N584 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
TTC39CQ8N584 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.91■■□□□ 1.42
TTC39CQ8N584 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.91■■□□□ 1.42
TTC39CQ8N584 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39CQ8N584 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TTC39CQ8N584 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TTC39CQ8N584 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.9■■□□□ 1.42
TTC39CQ8N584 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.9■■□□□ 1.42
TTC39CQ8N584 MIR4466-201ENST00000606121 54 ntBASIC23.9■■□□□ 1.42
TTC39CQ8N584 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TTC39CQ8N584 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TTC39CQ8N584 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TTC39CQ8N584 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TTC39CQ8N584 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.89■■□□□ 1.41
TTC39CQ8N584 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TTC39CQ8N584 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TTC39CQ8N584 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC39CQ8N584 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TTC39CQ8N584 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TTC39CQ8N584 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39CQ8N584 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39CQ8N584 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39CQ8N584 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39CQ8N584 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TTC39CQ8N584 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39CQ8N584 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39CQ8N584 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.87■■□□□ 1.41
TTC39CQ8N584 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.87■■□□□ 1.41
TTC39CQ8N584 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC39CQ8N584 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
TTC39CQ8N584 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.87■■□□□ 1.41
TTC39CQ8N584 DUX4L19-201ENST00000557448 1267 ntBASIC23.87■■□□□ 1.41
TTC39CQ8N584 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.87■■□□□ 1.41
TTC39CQ8N584 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.87■■□□□ 1.41
TTC39CQ8N584 AC008406.3-201ENST00000620001 1374 ntBASIC23.87■■□□□ 1.41
TTC39CQ8N584 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TTC39CQ8N584 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TTC39CQ8N584 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TTC39CQ8N584 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TTC39CQ8N584 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TTC39CQ8N584 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TTC39CQ8N584 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TTC39CQ8N584 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TTC39CQ8N584 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.85■■□□□ 1.41
TTC39CQ8N584 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TTC39CQ8N584 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.85■■□□□ 1.41
TTC39CQ8N584 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TTC39CQ8N584 AL136116.3-201ENST00000402907 1138 ntBASIC23.85■■□□□ 1.41
TTC39CQ8N584 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.85■■□□□ 1.41
TTC39CQ8N584 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.85■■□□□ 1.41
TTC39CQ8N584 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.85■■□□□ 1.41
TTC39CQ8N584 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TTC39CQ8N584 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.84■■□□□ 1.41
TTC39CQ8N584 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC39CQ8N584 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms