Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF440Q8IYI8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF440Q8IYI8 AC079630.1-202ENST00000618127 1840 ntBASIC20.57■□□□□ 0.88
ZNF440Q8IYI8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZNF440Q8IYI8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF440Q8IYI8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF440Q8IYI8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 AC068473.5-201ENST00000616428 2072 ntBASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF440Q8IYI8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 AC010997.5-201ENST00000609182 354 ntBASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF440Q8IYI8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF440Q8IYI8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 AC144652.1-201ENST00000609974 1624 ntBASIC20.52■□□□□ 0.88
ZNF440Q8IYI8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF440Q8IYI8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF440Q8IYI8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF440Q8IYI8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 TSPY9P-201ENST00000440215 945 ntBASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 TSPY11P-201ENST00000442607 1045 ntBASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF440Q8IYI8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF440Q8IYI8 FP325331.1-202ENST00000623531 1380 ntBASIC20.49■□□□□ 0.87
ZNF440Q8IYI8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF440Q8IYI8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF440Q8IYI8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF440Q8IYI8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF440Q8IYI8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF440Q8IYI8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms