Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAPTM4BQ86VI4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 MIR638-201ENST00000385237 100 ntBASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LAPTM4BQ86VI4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAPTM4BQ86VI4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 AC019069.1-201ENST00000610008 1333 ntBASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LAPTM4BQ86VI4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.33■■□□□ 1
LAPTM4BQ86VI4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.33■■□□□ 1
LAPTM4BQ86VI4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.33■■□□□ 1
LAPTM4BQ86VI4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.33■■□□□ 1
LAPTM4BQ86VI4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.32■■□□□ 1
LAPTM4BQ86VI4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.32■■□□□ 1
LAPTM4BQ86VI4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
LAPTM4BQ86VI4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LAPTM4BQ86VI4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAPTM4BQ86VI4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAPTM4BQ86VI4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LAPTM4BQ86VI4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAPTM4BQ86VI4 UNC93B3-201ENST00000308076 687 ntBASIC21.31■■□□□ 1
LAPTM4BQ86VI4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LAPTM4BQ86VI4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
LAPTM4BQ86VI4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.3■■□□□ 1
LAPTM4BQ86VI4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 PBX2P1-201ENST00000493219 1291 ntBASIC21.29■■□□□ 1
LAPTM4BQ86VI4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LAPTM4BQ86VI4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.28■■□□□ 1
LAPTM4BQ86VI4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAPTM4BQ86VI4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAPTM4BQ86VI4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LAPTM4BQ86VI4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAPTM4BQ86VI4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LAPTM4BQ86VI4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAPTM4BQ86VI4 LINC00543-201ENST00000567234 1845 ntBASIC21.28■■□□□ 1
LAPTM4BQ86VI4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms