Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.73■■□□□ 1.55
CDKAL1Q5VV42 AC010980.1-201ENST00000587192 1142 ntBASIC24.73■■□□□ 1.55
CDKAL1Q5VV42 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDKAL1Q5VV42 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CDKAL1Q5VV42 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDKAL1Q5VV42 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDKAL1Q5VV42 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.72■■□□□ 1.55
CDKAL1Q5VV42 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.72■■□□□ 1.55
CDKAL1Q5VV42 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.72■■□□□ 1.55
CDKAL1Q5VV42 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.72■■□□□ 1.55
CDKAL1Q5VV42 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.71■■□□□ 1.55
CDKAL1Q5VV42 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CDKAL1Q5VV42 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDKAL1Q5VV42 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.7■■□□□ 1.55
CDKAL1Q5VV42 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
CDKAL1Q5VV42 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDKAL1Q5VV42 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDKAL1Q5VV42 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDKAL1Q5VV42 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDKAL1Q5VV42 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 TSPY13P-201ENST00000338964 914 ntBASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 ESRRAP2-201ENST00000418437 1549 ntBASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDKAL1Q5VV42 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 AL353803.4-201ENST00000565882 1934 ntBASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDKAL1Q5VV42 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKAL1Q5VV42 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.66■■□□□ 1.54
CDKAL1Q5VV42 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDKAL1Q5VV42 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDKAL1Q5VV42 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDKAL1Q5VV42 MIR4508-201ENST00000584178 70 ntBASIC24.66■■□□□ 1.54
CDKAL1Q5VV42 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDKAL1Q5VV42 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDKAL1Q5VV42 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 AC127496.7-201ENST00000625110 1798 ntBASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDKAL1Q5VV42 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDKAL1Q5VV42 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDKAL1Q5VV42 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDKAL1Q5VV42 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.64■■□□□ 1.54
CDKAL1Q5VV42 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.64■■□□□ 1.54
CDKAL1Q5VV42 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.64■■□□□ 1.54
CDKAL1Q5VV42 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CDKAL1Q5VV42 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDKAL1Q5VV42 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 AC242852.2-201ENST00000615738 1807 ntBASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms