Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF17Q5VTA0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRAMEF17Q5VTA0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 AC241377.3-202ENST00000626088 1088 ntBASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 AC241585.3-202ENST00000628937 1088 ntBASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 AC245100.8-202ENST00000629247 1058 ntBASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRAMEF17Q5VTA0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 MIR939-201ENST00000401314 82 ntBASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 MIR3181-201ENST00000578512 73 ntBASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 AL139125.2-201ENST00000623134 1869 ntBASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRAMEF17Q5VTA0 AC004812.2-201ENST00000611079 2094 ntBASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRAMEF17Q5VTA0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 AC105265.2-201ENST00000467189 838 ntBASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PRAMEF17Q5VTA0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRAMEF17Q5VTA0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
PRAMEF17Q5VTA0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRAMEF17Q5VTA0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PRAMEF17Q5VTA0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRAMEF17Q5VTA0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 AC008764.7-201ENST00000593779 1081 ntBASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 pRNA.6-201ENST00000610482 90 ntBASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 pRNA.5-201ENST00000612139 90 ntBASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 AC011298.3-201ENST00000615796 283 ntBASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 pRNA.11-201ENST00000618423 90 ntBASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 pRNA.13-201ENST00000619112 90 ntBASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRAMEF17Q5VTA0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 AL138724.1-201ENST00000606771 1088 ntBASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PRAMEF17Q5VTA0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.37■■□□□ 1.01
PRAMEF17Q5VTA0 LINC00543-201ENST00000567234 1845 ntBASIC21.36■■□□□ 1.01
PRAMEF17Q5VTA0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF17Q5VTA0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PRAMEF17Q5VTA0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
PRAMEF17Q5VTA0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PRAMEF17Q5VTA0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PRAMEF17Q5VTA0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms