Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
LINC01554Q52M75 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC11.25□□□□□ -0.61
LINC01554Q52M75 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LINC01554Q52M75 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 CHML-205ENST00000638160 705 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01554Q52M75 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01554Q52M75 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01554Q52M75 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01554Q52M75 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 DUSP8P3-201ENST00000399571 1760 ntBASIC11.22□□□□□ -0.61
LINC01554Q52M75 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01554Q52M75 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
LINC01554Q52M75 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01554Q52M75 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01554Q52M75 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 WHAMMP2-203ENST00000563942 1603 ntBASIC11.22□□□□□ -0.61
LINC01554Q52M75 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01554Q52M75 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LINC01554Q52M75 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01554Q52M75 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01554Q52M75 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LINC01554Q52M75 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01554Q52M75 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC01554Q52M75 EI24-212ENST00000615917 1407 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01554Q52M75 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01554Q52M75 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC01554Q52M75 AC108673.1-201ENST00000510422 1159 ntBASIC11.21□□□□□ -0.61
LINC01554Q52M75 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LINC01554Q52M75 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC01554Q52M75 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
LINC01554Q52M75 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01554Q52M75 AC135983.2-203ENST00000454486 1613 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms