Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFX7Q2KHR2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFX7Q2KHR2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFX7Q2KHR2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.38■■□□□ 1.97
RFX7Q2KHR2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RFX7Q2KHR2 EDA-201ENST00000338901 1233 ntBASIC27.36■■□□□ 1.97
RFX7Q2KHR2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFX7Q2KHR2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFX7Q2KHR2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.36■■□□□ 1.97
RFX7Q2KHR2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.36■■□□□ 1.97
RFX7Q2KHR2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFX7Q2KHR2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
RFX7Q2KHR2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 AC142381.2-201ENST00000566120 298 ntBASIC27.35■■□□□ 1.97
RFX7Q2KHR2 SF1-220ENST00000626028 704 ntTSL 2 BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RFX7Q2KHR2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 AP001330.3-201ENST00000520123 633 ntBASIC27.34■■□□□ 1.97
RFX7Q2KHR2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.34■■□□□ 1.97
RFX7Q2KHR2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
RFX7Q2KHR2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFX7Q2KHR2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RFX7Q2KHR2 AC092068.2-201ENST00000590491 1708 ntBASIC27.33■■□□□ 1.97
RFX7Q2KHR2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RFX7Q2KHR2 AC009102.2-201ENST00000606772 1639 ntBASIC27.33■■□□□ 1.97
RFX7Q2KHR2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.33■■□□□ 1.97
RFX7Q2KHR2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.33■■□□□ 1.97
RFX7Q2KHR2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFX7Q2KHR2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFX7Q2KHR2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX7Q2KHR2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX7Q2KHR2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX7Q2KHR2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX7Q2KHR2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RFX7Q2KHR2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 MIR939-201ENST00000401314 82 ntBASIC27.31■■□□□ 1.96
RFX7Q2KHR2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.31■■□□□ 1.96
RFX7Q2KHR2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.3■■□□□ 1.96
RFX7Q2KHR2 C17orf82-201ENST00000623772 1530 ntBASIC27.3■■□□□ 1.96
RFX7Q2KHR2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
RFX7Q2KHR2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFX7Q2KHR2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.3■■□□□ 1.96
RFX7Q2KHR2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 AF213884.3-201ENST00000563833 479 ntBASIC27.29■■□□□ 1.96
RFX7Q2KHR2 AL355001.2-201ENST00000620617 1191 ntBASIC27.29■■□□□ 1.96
RFX7Q2KHR2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFX7Q2KHR2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 SERBP1P1-201ENST00000396021 1160 ntBASIC27.28■■□□□ 1.96
RFX7Q2KHR2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 ANOS2P-203ENST00000472227 1816 ntBASIC27.28■■□□□ 1.96
RFX7Q2KHR2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.28■■□□□ 1.96
RFX7Q2KHR2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms