Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.05■■□□□ 1.12
RSPO4Q2I0M5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RSPO4Q2I0M5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.03■■□□□ 1.12
RSPO4Q2I0M5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.03■■□□□ 1.12
RSPO4Q2I0M5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.03■■□□□ 1.12
RSPO4Q2I0M5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.03■■□□□ 1.12
RSPO4Q2I0M5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RSPO4Q2I0M5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RSPO4Q2I0M5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 AC087239.1-201ENST00000622671 572 ntBASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.02■■□□□ 1.12
RSPO4Q2I0M5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.11
RSPO4Q2I0M5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 AC011767.1-201ENST00000617410 1153 ntBASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RSPO4Q2I0M5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22■■□□□ 1.11
RSPO4Q2I0M5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22■■□□□ 1.11
RSPO4Q2I0M5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22■■□□□ 1.11
RSPO4Q2I0M5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22■■□□□ 1.11
RSPO4Q2I0M5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RSPO4Q2I0M5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RSPO4Q2I0M5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RSPO4Q2I0M5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RSPO4Q2I0M5 AC091060.1-201ENST00000623524 1766 ntBASIC21.99■■□□□ 1.11
RSPO4Q2I0M5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RSPO4Q2I0M5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RSPO4Q2I0M5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.99■■□□□ 1.11
RSPO4Q2I0M5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.99■■□□□ 1.11
RSPO4Q2I0M5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 AP004607.4-201ENST00000530158 1459 ntBASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RSPO4Q2I0M5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 AL121832.2-201ENST00000610979 668 ntBASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 AC105233.4-201ENST00000642045 216 ntBASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 AC004854.2-201ENST00000608450 1441 ntBASIC21.97■■□□□ 1.11
RSPO4Q2I0M5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.96■■□□□ 1.11
RSPO4Q2I0M5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RSPO4Q2I0M5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RSPO4Q2I0M5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RSPO4Q2I0M5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.96■■□□□ 1.11
RSPO4Q2I0M5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms