Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 SUDS3P1-201ENST00000505831 966 ntBASIC27.66■■■□□ 2.02
ATP2B3Q16720 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.66■■■□□ 2.02
ATP2B3Q16720 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.66■■■□□ 2.02
ATP2B3Q16720 AL138724.1-201ENST00000606771 1088 ntBASIC27.66■■■□□ 2.02
ATP2B3Q16720 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.66■■■□□ 2.02
ATP2B3Q16720 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
ATP2B3Q16720 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
ATP2B3Q16720 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ATP2B3Q16720 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.65■■■□□ 2.02
ATP2B3Q16720 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.65■■■□□ 2.02
ATP2B3Q16720 AC142381.2-201ENST00000566120 298 ntBASIC27.65■■■□□ 2.02
ATP2B3Q16720 MIR4767-201ENST00000582827 78 ntBASIC27.65■■■□□ 2.02
ATP2B3Q16720 AC011298.3-201ENST00000615796 283 ntBASIC27.65■■■□□ 2.02
ATP2B3Q16720 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ATP2B3Q16720 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ATP2B3Q16720 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.65■■■□□ 2.02
ATP2B3Q16720 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.65■■■□□ 2.02
ATP2B3Q16720 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ATP2B3Q16720 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.64■■■□□ 2.02
ATP2B3Q16720 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
ATP2B3Q16720 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.64■■■□□ 2.02
ATP2B3Q16720 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.64■■■□□ 2.02
ATP2B3Q16720 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.01
ATP2B3Q16720 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
ATP2B3Q16720 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ATP2B3Q16720 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ATP2B3Q16720 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ATP2B3Q16720 MIR3181-201ENST00000578512 73 ntBASIC27.63■■■□□ 2.01
ATP2B3Q16720 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.63■■■□□ 2.01
ATP2B3Q16720 AL355001.2-201ENST00000620617 1191 ntBASIC27.63■■■□□ 2.01
ATP2B3Q16720 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.63■■■□□ 2.01
ATP2B3Q16720 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.63■■■□□ 2.01
ATP2B3Q16720 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.62■■■□□ 2.01
ATP2B3Q16720 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
ATP2B3Q16720 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP2B3Q16720 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
ATP2B3Q16720 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.62■■■□□ 2.01
ATP2B3Q16720 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
ATP2B3Q16720 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP2B3Q16720 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP2B3Q16720 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP2B3Q16720 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
ATP2B3Q16720 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.61■■■□□ 2.01
ATP2B3Q16720 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
ATP2B3Q16720 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.61■■■□□ 2.01
ATP2B3Q16720 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATP2B3Q16720 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
ATP2B3Q16720 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
ATP2B3Q16720 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ATP2B3Q16720 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
ATP2B3Q16720 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ATP2B3Q16720 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
ATP2B3Q16720 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.6■■■□□ 2.01
ATP2B3Q16720 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.6■■■□□ 2.01
ATP2B3Q16720 AF213884.3-201ENST00000563833 479 ntBASIC27.6■■■□□ 2.01
ATP2B3Q16720 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.6■■■□□ 2.01
ATP2B3Q16720 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.6■■■□□ 2.01
ATP2B3Q16720 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
ATP2B3Q16720 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.59■■■□□ 2.01
ATP2B3Q16720 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
ATP2B3Q16720 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
ATP2B3Q16720 AP001330.3-201ENST00000520123 633 ntBASIC27.59■■■□□ 2.01
ATP2B3Q16720 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.59■■■□□ 2.01
ATP2B3Q16720 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
ATP2B3Q16720 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
ATP2B3Q16720 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.59■■■□□ 2.01
ATP2B3Q16720 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
ATP2B3Q16720 ABCB10P4-201ENST00000566803 2184 ntBASIC27.58■■■□□ 2.01
ATP2B3Q16720 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.58■■■□□ 2.01
ATP2B3Q16720 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.58■■■□□ 2.01
ATP2B3Q16720 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.58■■■□□ 2.01
ATP2B3Q16720 pRNA.6-201ENST00000610482 90 ntBASIC27.58■■■□□ 2.01
ATP2B3Q16720 pRNA.5-201ENST00000612139 90 ntBASIC27.58■■■□□ 2.01
ATP2B3Q16720 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.58■■■□□ 2.01
ATP2B3Q16720 pRNA.11-201ENST00000618423 90 ntBASIC27.58■■■□□ 2.01
ATP2B3Q16720 pRNA.13-201ENST00000619112 90 ntBASIC27.58■■■□□ 2.01
ATP2B3Q16720 AC136469.2-201ENST00000623944 1028 ntBASIC27.58■■■□□ 2.01
ATP2B3Q16720 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATP2B3Q16720 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
ATP2B3Q16720 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
ATP2B3Q16720 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.57■■■□□ 2
ATP2B3Q16720 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.57■■■□□ 2
ATP2B3Q16720 AL136967.2-201ENST00000623968 743 ntBASIC27.57■■■□□ 2
ATP2B3Q16720 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ATP2B3Q16720 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
ATP2B3Q16720 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.57■■■□□ 2
ATP2B3Q16720 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
ATP2B3Q16720 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.56■■■□□ 2
ATP2B3Q16720 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.56■■■□□ 2
ATP2B3Q16720 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ATP2B3Q16720 MIR939-201ENST00000401314 82 ntBASIC27.56■■■□□ 2
ATP2B3Q16720 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.56■■■□□ 2
ATP2B3Q16720 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms