Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB8AP61006 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB8AP61006 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RAB8AP61006 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB8AP61006 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB8AP61006 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.45■■□□□ 1.02
RAB8AP61006 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAB8AP61006 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RAB8AP61006 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB8AP61006 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB8AP61006 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RAB8AP61006 AC009102.2-201ENST00000606772 1639 ntBASIC21.44■■□□□ 1.02
RAB8AP61006 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.44■■□□□ 1.02
RAB8AP61006 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.44■■□□□ 1.02
RAB8AP61006 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.44■■□□□ 1.02
RAB8AP61006 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RAB8AP61006 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.44■■□□□ 1.02
RAB8AP61006 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB8AP61006 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB8AP61006 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB8AP61006 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RAB8AP61006 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.43■■□□□ 1.02
RAB8AP61006 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB8AP61006 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB8AP61006 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB8AP61006 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RAB8AP61006 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB8AP61006 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB8AP61006 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB8AP61006 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB8AP61006 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.42■■□□□ 1.02
RAB8AP61006 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB8AP61006 ANOS2P-203ENST00000472227 1816 ntBASIC21.42■■□□□ 1.02
RAB8AP61006 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB8AP61006 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB8AP61006 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.42■■□□□ 1.02
RAB8AP61006 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB8AP61006 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.41■■□□□ 1.02
RAB8AP61006 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB8AP61006 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.41■■□□□ 1.02
RAB8AP61006 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB8AP61006 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB8AP61006 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB8AP61006 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB8AP61006 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.4■■□□□ 1.02
RAB8AP61006 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.4■■□□□ 1.02
RAB8AP61006 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
RAB8AP61006 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.4■■□□□ 1.02
RAB8AP61006 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB8AP61006 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB8AP61006 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB8AP61006 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB8AP61006 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB8AP61006 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.39■■□□□ 1.02
RAB8AP61006 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.39■■□□□ 1.02
RAB8AP61006 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAB8AP61006 AC079630.1-202ENST00000618127 1840 ntBASIC21.39■■□□□ 1.02
RAB8AP61006 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.39■■□□□ 1.01
RAB8AP61006 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.39■■□□□ 1.01
RAB8AP61006 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RAB8AP61006 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAB8AP61006 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RAB8AP61006 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAB8AP61006 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB8AP61006 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB8AP61006 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB8AP61006 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
RAB8AP61006 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB8AP61006 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB8AP61006 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RAB8AP61006 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.38■■□□□ 1.01
RAB8AP61006 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB8AP61006 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RAB8AP61006 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RAB8AP61006 AC131281.2-201ENST00000520478 145 ntBASIC21.37■■□□□ 1.01
RAB8AP61006 AL512631.2-201ENST00000604634 923 ntBASIC21.37■■□□□ 1.01
RAB8AP61006 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms