Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 GDE1YPL110C 3672 nt4.47□□□□□ -1.69
YNL040WP53960 MNN4YKL201C 3537 nt4.47□□□□□ -1.69
YNL040WP53960 RTT103YDR289C 1230 nt4.47□□□□□ -1.69
YNL040WP53960 COX18YGR062C 951 nt4.47□□□□□ -1.69
YNL040WP53960 PXR1YGR280C 816 nt4.47□□□□□ -1.69
YNL040WP53960 CDC42YLR229C 576 nt4.47□□□□□ -1.69
YNL040WP53960 NKP2YLR315W 462 nt4.47□□□□□ -1.69
YNL040WP53960 SPS19YNL202W 879 nt4.47□□□□□ -1.69
YNL040WP53960 TIF5YPR041W 1218 nt4.47□□□□□ -1.69
YNL040WP53960 RAD52YML032C 1416 nt4.46□□□□□ -1.69
YNL040WP53960 SKG6YHR149C 2205 nt4.46□□□□□ -1.69
YNL040WP53960 STP4YDL048C 1473 nt4.46□□□□□ -1.7
YNL040WP53960 NMD4YLR363C 657 nt4.46□□□□□ -1.7
YNL040WP53960 TAF11YML015C 1041 nt4.46□□□□□ -1.7
YNL040WP53960 YNG1YOR064C 660 nt4.46□□□□□ -1.7
YNL040WP53960 HIS4YCL030C 2400 nt4.46□□□□□ -1.7
YNL040WP53960 RIM21YNL294C 1602 nt4.46□□□□□ -1.7
YNL040WP53960 MSE1YOL033W 1611 nt4.46□□□□□ -1.7
YNL040WP53960 ARN1YHL040C 1884 nt4.45□□□□□ -1.7
YNL040WP53960 FLO8YER109C 2400 nt4.45□□□□□ -1.7
YNL040WP53960 HST4YDR191W 1113 nt4.45□□□□□ -1.7
YNL040WP53960 CBP3YPL215W 1008 nt4.45□□□□□ -1.7
YNL040WP53960 PMC1YGL006W 3522 nt4.45□□□□□ -1.7
YNL040WP53960 YCF1YDR135C 4548 nt4.45□□□□□ -1.7
YNL040WP53960 VHS2YIL135C 1311 nt4.45□□□□□ -1.7
YNL040WP53960 TRF5YNL299W 1929 nt4.44□□□□□ -1.7
YNL040WP53960 CDS1YBR029C 1374 nt4.44□□□□□ -1.7
YNL040WP53960 RIA1YNL163C 3333 nt4.44□□□□□ -1.7
YNL040WP53960 COQ4YDR204W 1008 nt4.44□□□□□ -1.7
YNL040WP53960 BNA6YFR047C 888 nt4.44□□□□□ -1.7
YNL040WP53960 FRA2YGL220W 363 nt4.44□□□□□ -1.7
YNL040WP53960 YGR266WYGR266W 2106 nt4.44□□□□□ -1.7
YNL040WP53960 COS6YGR295C 1146 nt4.44□□□□□ -1.7
YNL040WP53960 FMP46YKR049C 402 nt4.44□□□□□ -1.7
YNL040WP53960 YNL067W-AYNL067W-A 147 nt4.44□□□□□ -1.7
YNL040WP53960 YOR379CYOR379C 339 nt4.44□□□□□ -1.7
YNL040WP53960 YPL025CYPL025C 558 nt4.44□□□□□ -1.7
YNL040WP53960 VAC7YNL054W 3498 nt4.44□□□□□ -1.7
YNL040WP53960 MBP1YDL056W 2502 nt4.44□□□□□ -1.7
YNL040WP53960 PHM7YOL084W 2976 nt4.44□□□□□ -1.7
YNL040WP53960 PRP31YGR091W 1485 nt4.43□□□□□ -1.7
YNL040WP53960 MKS1YNL076W 1755 nt4.43□□□□□ -1.7
YNL040WP53960 TIF4632YGL049C 2745 nt4.43□□□□□ -1.7
YNL040WP53960 MRE11YMR224C 2079 nt4.43□□□□□ -1.7
YNL040WP53960 FMP33YJL161W 543 nt4.43□□□□□ -1.7
YNL040WP53960 YLR407WYLR407W 687 nt4.43□□□□□ -1.7
YNL040WP53960 TOM40YMR203W 1164 nt4.43□□□□□ -1.7
YNL040WP53960 AZR1YGR224W 1842 nt4.43□□□□□ -1.7
YNL040WP53960 GCR1YPL075W 2358 nt4.43□□□□□ -1.7
YNL040WP53960 IML2YJL082W 2196 nt4.43□□□□□ -1.7
YNL040WP53960 THI13YDL244W 1023 nt4.42□□□□□ -1.7
YNL040WP53960 TAF10YDR167W 621 nt4.42□□□□□ -1.7
YNL040WP53960 SVF1YDR346C 1446 nt4.42□□□□□ -1.7
YNL040WP53960 THI11YJR156C 1023 nt4.42□□□□□ -1.7
YNL040WP53960 CNB1YKL190W 528 nt4.42□□□□□ -1.7
YNL040WP53960 RRT7YLL030C 342 nt4.42□□□□□ -1.7
YNL040WP53960 RRN9YMR270C 1098 nt4.42□□□□□ -1.7
YNL040WP53960 RRP40YOL142W 723 nt4.42□□□□□ -1.7
YNL040WP53960 HPC2YBR215W 1878 nt4.42□□□□□ -1.7
YNL040WP53960 RER1YCL001W 567 nt4.42□□□□□ -1.7
YNL040WP53960 EMP47YFL048C 1338 nt4.42□□□□□ -1.7
YNL040WP53960 GAL4YPL248C 2646 nt4.42□□□□□ -1.7
YNL040WP53960 KCC4YCL024W 3114 nt4.41□□□□□ -1.7
YNL040WP53960 SLD2YKL108W 1362 nt4.41□□□□□ -1.7
YNL040WP53960 PRE9YGR135W 777 nt4.41□□□□□ -1.7
YNL040WP53960 MAC1YMR021C 1254 nt4.41□□□□□ -1.7
YNL040WP53960 TOM7YNL070W 183 nt4.41□□□□□ -1.7
YNL040WP53960 YNL217WYNL217W 981 nt4.41□□□□□ -1.7
YNL040WP53960 PDX3YBR035C 687 nt4.41□□□□□ -1.7
YNL040WP53960 FPK1YNR047W 2682 nt4.41□□□□□ -1.7
YNL040WP53960 WTM1YOR230W 1314 nt4.41□□□□□ -1.7
YNL040WP53960 RAM1YDL090C 1296 nt4.4□□□□□ -1.71
YNL040WP53960 tQ(UUG)CtQ(UUG)C 72 nt4.4□□□□□ -1.71
YNL040WP53960 tQ(UUG)D1tQ(UUG)D1 72 nt4.4□□□□□ -1.71
YNL040WP53960 tQ(UUG)D2tQ(UUG)D2 72 nt4.4□□□□□ -1.71
YNL040WP53960 SOL4YGR248W 768 nt4.4□□□□□ -1.71
YNL040WP53960 tQ(UUG)D3tQ(UUG)D3 72 nt4.4□□□□□ -1.71
YNL040WP53960 tQ(UUG)E1tQ(UUG)E1 72 nt4.4□□□□□ -1.71
YNL040WP53960 tQ(UUG)HtQ(UUG)H 72 nt4.4□□□□□ -1.71
YNL040WP53960 tQ(UUG)LtQ(UUG)L 72 nt4.4□□□□□ -1.71
YNL040WP53960 RAD27YKL113C 1149 nt4.4□□□□□ -1.71
YNL040WP53960 TDA5YLR426W 981 nt4.4□□□□□ -1.71
YNL040WP53960 OSW5YMR148W 447 nt4.4□□□□□ -1.71
YNL040WP53960 SPS18YNL204C 903 nt4.4□□□□□ -1.71
YNL040WP53960 PBN1YCL052C 1251 nt4.4□□□□□ -1.71
YNL040WP53960 MMR1YLR190W 1476 nt4.4□□□□□ -1.71
YNL040WP53960 CBP1YJL209W 1965 nt4.4□□□□□ -1.71
YNL040WP53960 UBP7YIL156W 3216 nt4.4□□□□□ -1.71
YNL040WP53960 SUL2YLR092W 2682 nt4.39□□□□□ -1.71
YNL040WP53960 SIS2YKR072C 1689 nt4.39□□□□□ -1.71
YNL040WP53960 RXT3YDL076C 885 nt4.39□□□□□ -1.71
YNL040WP53960 YIL171WYIL171W 330 nt4.39□□□□□ -1.71
YNL040WP53960 ECM1YAL059W 639 nt4.39□□□□□ -1.71
YNL040WP53960 RPL15BYMR121C 615 nt4.39□□□□□ -1.71
YNL040WP53960 YPL077CYPL077C 723 nt4.39□□□□□ -1.71
YNL040WP53960 GDH2YDL215C 3279 nt4.39□□□□□ -1.71
YNL040WP53960 ADP1YCR011C 3150 nt4.39□□□□□ -1.71
YNL040WP53960 BRE4YDL231C 3378 nt4.38□□□□□ -1.71
YNL040WP53960 KRE28YDR532C 1158 nt4.38□□□□□ -1.71
YNL040WP53960 SEC72YLR292C 582 nt4.38□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms