RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeastyeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC7YNL054W MON2P48563 1636 aaPredicted RBP6.28□□□□□ -1.4
VAC7YNL054W BFR2Q06631 534 aaKnown RBP6.25□□□□□ -1.41
VAC7YNL054W NOP2P40991 618 aaKnown RBP6.18□□□□□ -1.42
VAC7YNL054W RQC2Q12532 1038 aaKnown RBP6.17□□□□□ -1.42
VAC7YNL054W DRS1P32892 752 aaKnown RBP6□□□□□ -1.45
VAC7YNL054W NSR1P27476 414 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
VAC7YNL054W CAB3P36076 571 aa5.92□□□□□ -1.46
VAC7YNL054W SGS1P35187 1447 aa5.92□□□□□ -1.46
VAC7YNL054W TAF7Q05021 590 aa5.84□□□□□ -1.47
VAC7YNL054W SSN2P38931 1420 aa5.81□□□□□ -1.48
VAC7YNL054W EBP2P36049 427 aaKnown RBP5.8□□□□□ -1.48
VAC7YNL054W SPA2P23201 1466 aaKnown RBP5.78□□□□□ -1.48
VAC7YNL054W RSE1Q04693 1361 aaKnown RBP5.77□□□□□ -1.49
VAC7YNL054W SAS10Q12136 610 aaPredicted RBP5.76□□□□□ -1.49
VAC7YNL054W YPR148CQ06523 435 aa5.72□□□□□ -1.49
VAC7YNL054W LEU3P08638 886 aa5.69□□□□□ -1.5
VAC7YNL054W ENP1P38333 483 aaKnown RBP5.67□□□□□ -1.5
VAC7YNL054W MNN4P36044 1178 aa5.66□□□□□ -1.5
VAC7YNL054W SKI3P17883 1432 aaKnown RBP5.65□□□□□ -1.5
VAC7YNL054W POL5P39985 1022 aaKnown RBP5.65□□□□□ -1.51
VAC7YNL054W KOG1P38873 1557 aa5.61□□□□□ -1.51
VAC7YNL054W AIM44Q99299 758 aa5.61□□□□□ -1.51
VAC7YNL054W LEO1P38439 464 aa5.6□□□□□ -1.51
VAC7YNL054W SPT7P35177 1332 aa5.58□□□□□ -1.52
VAC7YNL054W RTT106P40161 455 aa5.57□□□□□ -1.52
VAC7YNL054W YFR016CP43597 1233 aaKnown RBP5.57□□□□□ -1.52
VAC7YNL054W SIS2P36024 562 aa5.54□□□□□ -1.52
VAC7YNL054W AVT3P36062 692 aa5.53□□□□□ -1.52
VAC7YNL054W FUN12P39730 1002 aaKnown RBP5.51□□□□□ -1.53
VAC7YNL054W EAF7P53911 425 aaKnown RBP5.51□□□□□ -1.53
VAC7YNL054W ORC1P54784 914 aaPredicted RBP5.5□□□□□ -1.53
VAC7YNL054W CLC1P17891 233 aa5.48□□□□□ -1.53
VAC7YNL054W SWR1Q05471 1514 aa5.48□□□□□ -1.53
VAC7YNL054W IFH1P39520 1085 aa5.47□□□□□ -1.53
VAC7YNL054W MMS22Q06164 1454 aa5.45□□□□□ -1.54
VAC7YNL054W SEC3P33332 1336 aaKnown RBP5.44□□□□□ -1.54
VAC7YNL054W TY1B-DR4Q07793 1604 aa5.44□□□□□ -1.54
VAC7YNL054W RPC31P17890 251 aa5.43□□□□□ -1.54
VAC7YNL054W TAF2P23255 1407 aa5.43□□□□□ -1.54
VAC7YNL054W PRS1P32895 427 aaKnown RBP5.43□□□□□ -1.54
VAC7YNL054W INO80P53115 1489 aa5.41□□□□□ -1.54
VAC7YNL054W IKI3Q06706 1349 aaKnown RBP5.39□□□□□ -1.55
VAC7YNL054W TCB2P48231 1178 aa5.39□□□□□ -1.55
VAC7YNL054W PSD2P53037 1138 aaKnown RBP5.39□□□□□ -1.55
VAC7YNL054W FPR3P38911 411 aaKnown RBP5.39□□□□□ -1.55
VAC7YNL054W URN1Q06525 465 aaKnown RBP5.38□□□□□ -1.55
VAC7YNL054W RNA1P11745 407 aaKnown RBP5.37□□□□□ -1.55
VAC7YNL054W TFA1P36100 482 aa5.37□□□□□ -1.55
VAC7YNL054W IME2P32581 645 aa5.36□□□□□ -1.55
VAC7YNL054W CFT1Q06632 1357 aaKnown RBP5.36□□□□□ -1.55
VAC7YNL054W SSM4P40318 1319 aa5.35□□□□□ -1.55
VAC7YNL054W TCB3Q03640 1545 aaKnown RBP5.35□□□□□ -1.55
VAC7YNL054W CWC22P53333 577 aaKnown RBP5.34□□□□□ -1.55
VAC7YNL054W STH1P32597 1359 aa5.34□□□□□ -1.55
VAC7YNL054W TRM732Q03496 1420 aa5.34□□□□□ -1.55
VAC7YNL054W XRN1P22147 1528 aaKnown RBP5.33□□□□□ -1.56
VAC7YNL054W SPP41P38904 1435 aa5.33□□□□□ -1.56
VAC7YNL054W QCR6P00127 147 aa5.33□□□□□ -1.56
VAC7YNL054W DJP1P40564 432 aa5.32□□□□□ -1.56
VAC7YNL054W YRB30P53107 440 aaPredicted RBP5.32□□□□□ -1.56
VAC7YNL054W UFD4P33202 1483 aa5.31□□□□□ -1.56
VAC7YNL054W MTC1P47018 478 aaKnown RBP5.29□□□□□ -1.56
VAC7YNL054W NOP7P53261 605 aaKnown RBP5.28□□□□□ -1.56
VAC7YNL054W PAN1P32521 1480 aa5.27□□□□□ -1.57
VAC7YNL054W YPP1P46951 817 aa5.27□□□□□ -1.57
VAC7YNL054W OPY1P38271 328 aa5.27□□□□□ -1.57
VAC7YNL054W SNF7P39929 240 aaKnown RBP5.26□□□□□ -1.57
VAC7YNL054W RPS0BP46654 252 aaKnown RBP5.26□□□□□ -1.57
VAC7YNL054W YTA7P40340 1379 aa5.26□□□□□ -1.57
VAC7YNL054W NAP1P25293 417 aaKnown RBP5.25□□□□□ -1.57
VAC7YNL054W MYO2P19524 1574 aaKnown RBP5.25□□□□□ -1.57
VAC7YNL054W SPT21P35209 758 aa5.24□□□□□ -1.57
VAC7YNL054W PAF1P38351 445 aa5.24□□□□□ -1.57
VAC7YNL054W FPR4Q06205 392 aaPredicted RBP5.24□□□□□ -1.57
VAC7YNL054W SSK2P53599 1579 aa5.24□□□□□ -1.57
VAC7YNL054W DNA2P38859 1522 aa5.24□□□□□ -1.57
VAC7YNL054W BUD4P47136 1447 aa5.24□□□□□ -1.57
VAC7YNL054W NOP58Q12499 511 aaKnown RBP5.23□□□□□ -1.57
VAC7YNL054W STU1P38198 1513 aa5.23□□□□□ -1.57
VAC7YNL054W CHD1P32657 1468 aa5.23□□□□□ -1.57
VAC7YNL054W ROX1P25042 368 aa5.22□□□□□ -1.57
VAC7YNL054W THO2P53552 1597 aaKnown RBP5.22□□□□□ -1.57
VAC7YNL054W SWE1P32944 819 aa5.21□□□□□ -1.58
VAC7YNL054W RAD26P40352 1085 aa5.21□□□□□ -1.58
VAC7YNL054W YGR130CP53278 816 aa5.21□□□□□ -1.58
VAC7YNL054W CTR9P89105 1077 aa5.2□□□□□ -1.58
VAC7YNL054W PDS5Q04264 1277 aa5.2□□□□□ -1.58
VAC7YNL054W SPT6P23615 1451 aaKnown RBP5.2□□□□□ -1.58
VAC7YNL054W DEF1P35732 738 aaKnown RBP5.2□□□□□ -1.58
VAC7YNL054W YGL081WP53156 320 aa5.2□□□□□ -1.58
VAC7YNL054W SLN1P39928 1220 aaPredicted RBP5.19□□□□□ -1.58
VAC7YNL054W ENV11P53246 860 aa5.19□□□□□ -1.58
VAC7YNL054W SPB4P25808 606 aaPredicted RBP5.18□□□□□ -1.58
VAC7YNL054W ARL1P38116 183 aaKnown RBP5.18□□□□□ -1.58
VAC7YNL054W ECM5Q03214 1411 aa5.18□□□□□ -1.58
VAC7YNL054W SMC4Q12267 1418 aa5.17□□□□□ -1.58
VAC7YNL054W CLB5P30283 435 aa5.17□□□□□ -1.58
VAC7YNL054W VPS24P36095 224 aaKnown RBP5.17□□□□□ -1.58
VAC7YNL054W DOS2P54858 310 aa5.17□□□□□ -1.58
VAC7YNL054W PSH1Q12161 406 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms