Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MECP2P51608 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MECP2P51608 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MECP2P51608 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MECP2P51608 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.13■□□□□ 0.65
MECP2P51608 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
MECP2P51608 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MECP2P51608 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.12■□□□□ 0.65
MECP2P51608 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.12■□□□□ 0.65
MECP2P51608 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MECP2P51608 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.12■□□□□ 0.65
MECP2P51608 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MECP2P51608 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
MECP2P51608 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MECP2P51608 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.11■□□□□ 0.65
MECP2P51608 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MECP2P51608 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MECP2P51608 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MECP2P51608 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.11■□□□□ 0.65
MECP2P51608 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MECP2P51608 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.11■□□□□ 0.65
MECP2P51608 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.1■□□□□ 0.65
MECP2P51608 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MECP2P51608 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MECP2P51608 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.1■□□□□ 0.65
MECP2P51608 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.1■□□□□ 0.65
MECP2P51608 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MECP2P51608 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MECP2P51608 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MECP2P51608 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.09■□□□□ 0.65
MECP2P51608 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.09■□□□□ 0.65
MECP2P51608 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MECP2P51608 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
MECP2P51608 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MECP2P51608 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
MECP2P51608 AL161729.1-201ENST00000604104 1402 ntBASIC19.08■□□□□ 0.65
MECP2P51608 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
MECP2P51608 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
MECP2P51608 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.08■□□□□ 0.65
MECP2P51608 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.08■□□□□ 0.65
MECP2P51608 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
MECP2P51608 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MECP2P51608 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MECP2P51608 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MECP2P51608 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MECP2P51608 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MECP2P51608 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.08■□□□□ 0.64
MECP2P51608 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MECP2P51608 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MECP2P51608 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.07■□□□□ 0.64
MECP2P51608 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MECP2P51608 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MECP2P51608 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MECP2P51608 C11orf96-202ENST00000528572 1834 ntBASIC19.07■□□□□ 0.64
MECP2P51608 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms