Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2AP49459 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2AP49459 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2AP49459 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
UBE2AP49459 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.17□□□□□ -0.14
UBE2AP49459 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
UBE2AP49459 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
UBE2AP49459 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.17□□□□□ -0.14
UBE2AP49459 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.17□□□□□ -0.14
UBE2AP49459 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
UBE2AP49459 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 AC120024.1-201ENST00000562672 995 ntBASIC14.17□□□□□ -0.14
UBE2AP49459 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2AP49459 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UBE2AP49459 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
UBE2AP49459 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.16□□□□□ -0.14
UBE2AP49459 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2AP49459 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2AP49459 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.16□□□□□ -0.14
UBE2AP49459 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2AP49459 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2AP49459 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.16□□□□□ -0.14
UBE2AP49459 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2AP49459 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2AP49459 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2AP49459 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2AP49459 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2AP49459 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2AP49459 CASK-201ENST00000378154 2494 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2AP49459 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UBE2AP49459 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2AP49459 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2AP49459 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2AP49459 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2AP49459 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UBE2AP49459 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2AP49459 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBE2AP49459 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2AP49459 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
UBE2AP49459 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2AP49459 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2AP49459 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UBE2AP49459 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2AP49459 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2AP49459 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2AP49459 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2AP49459 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2AP49459 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBE2AP49459 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 KRT8P33-201ENST00000508125 1423 ntBASIC14.14□□□□□ -0.15
UBE2AP49459 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2AP49459 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2AP49459 AC012676.1-201ENST00000574705 1949 ntBASIC14.13□□□□□ -0.15
UBE2AP49459 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2AP49459 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2AP49459 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2AP49459 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2AP49459 KRT18P24-201ENST00000344739 1156 ntBASIC14.13□□□□□ -0.15
UBE2AP49459 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2AP49459 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2AP49459 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2AP49459 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2AP49459 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2AP49459 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2AP49459 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2AP49459 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2AP49459 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2AP49459 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBE2AP49459 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms