Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 IRC9YJL142C 393 nt3.49□□□□□ -1.85
RPB11P38902 PRE7YBL041W 726 nt3.49□□□□□ -1.85
RPB11P38902 POP3YNL282W 588 nt3.49□□□□□ -1.85
RPB11P38902 RMI1YPL024W 726 nt3.49□□□□□ -1.85
RPB11P38902 SRB6YBR253W 366 nt3.49□□□□□ -1.85
RPB11P38902 RAD52YML032C 1416 nt3.49□□□□□ -1.85
RPB11P38902 PRP9YDL030W 1593 nt3.49□□□□□ -1.85
RPB11P38902 PUT2YHR037W 1728 nt3.49□□□□□ -1.85
RPB11P38902 VMA1YDL185W 3216 nt3.49□□□□□ -1.85
RPB11P38902 CHD1YER164W 4407 nt3.49□□□□□ -1.85
RPB11P38902 TCO89YPL180W 2400 nt3.48□□□□□ -1.85
RPB11P38902 ERP5YHR110W 639 nt3.48□□□□□ -1.85
RPB11P38902 NMD4YLR363C 657 nt3.48□□□□□ -1.85
RPB11P38902 AIF1YNR074C 1137 nt3.48□□□□□ -1.85
RPB11P38902 YCF1YDR135C 4548 nt3.48□□□□□ -1.85
RPB11P38902 MEF2YJL102W 2460 nt3.48□□□□□ -1.85
RPB11P38902 GAL11YOL051W 3246 nt3.48□□□□□ -1.85
RPB11P38902 OPT2YPR194C 2634 nt3.47□□□□□ -1.85
RPB11P38902 TPA1YER049W 1935 nt3.47□□□□□ -1.85
RPB11P38902 COA3YJL062W-A 258 nt3.47□□□□□ -1.85
RPB11P38902 KRE9YJL174W 831 nt3.47□□□□□ -1.85
RPB11P38902 SHE1YBL031W 1017 nt3.47□□□□□ -1.85
RPB11P38902 MET8YBR213W 825 nt3.47□□□□□ -1.85
RPB11P38902 SMF1YOL122C 1728 nt3.47□□□□□ -1.85
RPB11P38902 CBP1YJL209W 1965 nt3.46□□□□□ -1.86
RPB11P38902 ADD66YKL206C 804 nt3.46□□□□□ -1.86
RPB11P38902 MRM1YOR201C 1239 nt3.46□□□□□ -1.86
RPB11P38902 YPR174CYPR174C 666 nt3.46□□□□□ -1.86
RPB11P38902 HMG1YML075C 3165 nt3.46□□□□□ -1.86
RPB11P38902 DIP2YLR129W 2832 nt3.46□□□□□ -1.86
RPB11P38902 MET12YPL023C 1974 nt3.45□□□□□ -1.86
RPB11P38902 RDH54YBR073W 2877 nt3.45□□□□□ -1.86
RPB11P38902 YDL172CYDL172C 480 nt3.45□□□□□ -1.86
RPB11P38902 SNF11YDR073W 510 nt3.45□□□□□ -1.86
RPB11P38902 SPR28YDR218C 1272 nt3.45□□□□□ -1.86
RPB11P38902 TYW3YGL050W 822 nt3.45□□□□□ -1.86
RPB11P38902 COX4YGL187C 468 nt3.45□□□□□ -1.86
RPB11P38902 ORM1YGR038W 669 nt3.45□□□□□ -1.86
RPB11P38902 YKL169CYKL169C 384 nt3.45□□□□□ -1.86
RPB11P38902 APS1YLR170C 471 nt3.45□□□□□ -1.86
RPB11P38902 SLD7YOR060C 774 nt3.45□□□□□ -1.86
RPB11P38902 MFM1YPL060W 1242 nt3.45□□□□□ -1.86
RPB11P38902 IDI1YPL117C 867 nt3.45□□□□□ -1.86
RPB11P38902 STP22YCL008C 1158 nt3.45□□□□□ -1.86
RPB11P38902 CBF5YLR175W 1452 nt3.45□□□□□ -1.86
RPB11P38902 NMD3YHR170W 1557 nt3.45□□□□□ -1.86
RPB11P38902 MTR10YOR160W 2919 nt3.45□□□□□ -1.86
RPB11P38902 YJR015WYJR015W 1533 nt3.44□□□□□ -1.86
RPB11P38902 LPP1YDR503C 825 nt3.44□□□□□ -1.86
RPB11P38902 RPL24AYGL031C 468 nt3.44□□□□□ -1.86
RPB11P38902 LSB1YGR136W 726 nt3.44□□□□□ -1.86
RPB11P38902 YIL028WYIL028W 399 nt3.44□□□□□ -1.86
RPB11P38902 YIL171WYIL171W 330 nt3.44□□□□□ -1.86
RPB11P38902 AAD10YJR155W 867 nt3.44□□□□□ -1.86
RPB11P38902 RAD27YKL113C 1149 nt3.44□□□□□ -1.86
RPB11P38902 SAP30YMR263W 606 nt3.44□□□□□ -1.86
RPB11P38902 SIW14YNL032W 846 nt3.44□□□□□ -1.86
RPB11P38902 OCA1YNL099C 717 nt3.44□□□□□ -1.86
RPB11P38902 SAT4YCR008W 1812 nt3.44□□□□□ -1.86
RPB11P38902 YMR221CYMR221C 1515 nt3.44□□□□□ -1.86
RPB11P38902 RSC3YDR303C 2658 nt3.43□□□□□ -1.86
RPB11P38902 LDB17YDL146W 1476 nt3.43□□□□□ -1.86
RPB11P38902 MHO1YJR008W 1017 nt3.43□□□□□ -1.86
RPB11P38902 MRPL4YLR439W 960 nt3.43□□□□□ -1.86
RPB11P38902 PIM1YBL022C 3402 nt3.43□□□□□ -1.86
RPB11P38902 DRN1YGR093W 1524 nt3.43□□□□□ -1.86
RPB11P38902 TDA6YPR157W 1404 nt3.43□□□□□ -1.86
RPB11P38902 TAF7YMR227C 1773 nt3.43□□□□□ -1.86
RPB11P38902 GAD1YMR250W 1758 nt3.43□□□□□ -1.86
RPB11P38902 BIK1YCL029C 1323 nt3.43□□□□□ -1.86
RPB11P38902 STU1YBL034C 4542 nt3.42□□□□□ -1.86
RPB11P38902 RSC30YHR056C 2652 nt3.42□□□□□ -1.86
RPB11P38902 ALG6YOR002W 1635 nt3.42□□□□□ -1.86
RPB11P38902 GRS2YPR081C 1857 nt3.42□□□□□ -1.86
RPB11P38902 RPP1AYDL081C 321 nt3.42□□□□□ -1.86
RPB11P38902 ARF2YDL137W 546 nt3.42□□□□□ -1.86
RPB11P38902 RRP45YDR280W 918 nt3.42□□□□□ -1.86
RPB11P38902 SAE3YHR079C-A 276 nt3.42□□□□□ -1.86
RPB11P38902 SRP40YKR092C 1221 nt3.42□□□□□ -1.86
RPB11P38902 FSH3YOR280C 801 nt3.42□□□□□ -1.86
RPB11P38902 SWI3YJL176C 2478 nt3.42□□□□□ -1.86
RPB11P38902 ADP1YCR011C 3150 nt3.41□□□□□ -1.86
RPB11P38902 NTH1YDR001C 2256 nt3.41□□□□□ -1.86
RPB11P38902 IXR1YKL032C 1794 nt3.41□□□□□ -1.86
RPB11P38902 BCK2YER167W 2556 nt3.41□□□□□ -1.86
RPB11P38902 RTA1YGR213C 954 nt3.41□□□□□ -1.86
RPB11P38902 LOH1YJL038C 660 nt3.41□□□□□ -1.86
RPB11P38902 YRA2YKL214C 612 nt3.41□□□□□ -1.86
RPB11P38902 CUS2YNL286W 858 nt3.41□□□□□ -1.86
RPB11P38902 RCL1YOL010W 1104 nt3.41□□□□□ -1.86
RPB11P38902 TUB2YFL037W 1374 nt3.4□□□□□ -1.86
RPB11P38902 RPS13YDR064W 456 nt3.4□□□□□ -1.87
RPB11P38902 tS(AGA)D3tS(AGA)D3 83 nt3.4□□□□□ -1.87
RPB11P38902 YBL059WYBL059W 582 nt3.4□□□□□ -1.87
RPB11P38902 UTP23YOR004W 765 nt3.4□□□□□ -1.87
RPB11P38902 SPO19YPL130W 672 nt3.4□□□□□ -1.87
RPB11P38902 UMP1YBR173C 447 nt3.4□□□□□ -1.87
RPB11P38902 ARG4YHR018C 1392 nt3.39□□□□□ -1.87
RPB11P38902 YGL088WYGL088W 366 nt3.39□□□□□ -1.87
RPB11P38902 HIS6YIL020C 786 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms