Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COL8A2P25067 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL8A2P25067 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL8A2P25067 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19■□□□□ 0.63
COL8A2P25067 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL8A2P25067 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19■□□□□ 0.63
COL8A2P25067 MIR4767-201ENST00000582827 78 ntBASIC19■□□□□ 0.63
COL8A2P25067 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19■□□□□ 0.63
COL8A2P25067 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19■□□□□ 0.63
COL8A2P25067 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
COL8A2P25067 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19■□□□□ 0.63
COL8A2P25067 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL8A2P25067 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL8A2P25067 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL8A2P25067 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.99■□□□□ 0.63
COL8A2P25067 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
COL8A2P25067 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.99■□□□□ 0.63
COL8A2P25067 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
COL8A2P25067 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COL8A2P25067 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL8A2P25067 AL139125.2-201ENST00000623134 1869 ntBASIC18.99■□□□□ 0.63
COL8A2P25067 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
COL8A2P25067 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.98■□□□□ 0.63
COL8A2P25067 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.98■□□□□ 0.63
COL8A2P25067 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.98■□□□□ 0.63
COL8A2P25067 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.98■□□□□ 0.63
COL8A2P25067 AC009086.3-201ENST00000623486 1008 ntBASIC18.98■□□□□ 0.63
COL8A2P25067 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.98■□□□□ 0.63
COL8A2P25067 AL136967.2-201ENST00000623968 743 ntBASIC18.98■□□□□ 0.63
COL8A2P25067 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COL8A2P25067 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL8A2P25067 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COL8A2P25067 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL8A2P25067 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL8A2P25067 LINC00543-201ENST00000567234 1845 ntBASIC18.97■□□□□ 0.63
COL8A2P25067 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
COL8A2P25067 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.97■□□□□ 0.63
COL8A2P25067 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COL8A2P25067 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.97■□□□□ 0.63
COL8A2P25067 AL138724.1-201ENST00000606771 1088 ntBASIC18.97■□□□□ 0.63
COL8A2P25067 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.97■□□□□ 0.63
COL8A2P25067 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL8A2P25067 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL8A2P25067 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.97■□□□□ 0.63
COL8A2P25067 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL8A2P25067 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL8A2P25067 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.96■□□□□ 0.63
COL8A2P25067 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.96■□□□□ 0.63
COL8A2P25067 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.96■□□□□ 0.63
COL8A2P25067 AF213884.3-201ENST00000563833 479 ntBASIC18.96■□□□□ 0.63
COL8A2P25067 MIR3181-201ENST00000578512 73 ntBASIC18.96■□□□□ 0.63
COL8A2P25067 AC141586.4-201ENST00000624558 1573 ntBASIC18.96■□□□□ 0.63
COL8A2P25067 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.96■□□□□ 0.63
COL8A2P25067 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.96■□□□□ 0.63
COL8A2P25067 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL8A2P25067 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL8A2P25067 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL8A2P25067 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL8A2P25067 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.96■□□□□ 0.63
COL8A2P25067 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL8A2P25067 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COL8A2P25067 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL8A2P25067 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL8A2P25067 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL8A2P25067 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
COL8A2P25067 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.95■□□□□ 0.62
COL8A2P25067 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL8A2P25067 ZNRF2P3-201ENST00000424200 374 ntBASIC18.95■□□□□ 0.62
COL8A2P25067 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.95■□□□□ 0.62
COL8A2P25067 AC011298.3-201ENST00000615796 283 ntBASIC18.95■□□□□ 0.62
COL8A2P25067 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL8A2P25067 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL8A2P25067 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL8A2P25067 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COL8A2P25067 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
COL8A2P25067 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms