Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3BP20337 AL022069.1-201ENST00000568025 1636 ntBASIC19.69■□□□□ 0.74
RAB3BP20337 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
RAB3BP20337 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3BP20337 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB3BP20337 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB3BP20337 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB3BP20337 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB3BP20337 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB3BP20337 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 AL024507.2-201ENST00000606070 2574 ntBASIC19.67■□□□□ 0.74
RAB3BP20337 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3BP20337 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB3BP20337 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB3BP20337 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
RAB3BP20337 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB3BP20337 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 AC022413.1-201ENST00000624602 984 ntBASIC19.66■□□□□ 0.74
RAB3BP20337 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB3BP20337 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3BP20337 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB3BP20337 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB3BP20337 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RAB3BP20337 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB3BP20337 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.65■□□□□ 0.74
RAB3BP20337 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB3BP20337 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB3BP20337 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RAB3BP20337 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3BP20337 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3BP20337 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3BP20337 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.64■□□□□ 0.74
RAB3BP20337 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3BP20337 ABHD17AP4-201ENST00000411545 909 ntBASIC19.64■□□□□ 0.73
RAB3BP20337 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB3BP20337 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
RAB3BP20337 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3BP20337 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3BP20337 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB3BP20337 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB3BP20337 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB3BP20337 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3BP20337 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3BP20337 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3BP20337 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3BP20337 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3BP20337 ALDH1A3-203ENST00000557963 1670 ntBASIC19.62■□□□□ 0.73
RAB3BP20337 AL137060.1-201ENST00000618151 2648 ntBASIC19.62■□□□□ 0.73
RAB3BP20337 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RAB3BP20337 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RAB3BP20337 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB3BP20337 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3BP20337 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
RAB3BP20337 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3BP20337 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3BP20337 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3BP20337 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3BP20337 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms