Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.71■□□□□ 0.91
THBS1P07996 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
THBS1P07996 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
THBS1P07996 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.71■□□□□ 0.91
THBS1P07996 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
THBS1P07996 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
THBS1P07996 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
THBS1P07996 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.7■□□□□ 0.9
THBS1P07996 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.7■□□□□ 0.9
THBS1P07996 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.7■□□□□ 0.9
THBS1P07996 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS1P07996 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
THBS1P07996 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
THBS1P07996 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
THBS1P07996 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THBS1P07996 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
THBS1P07996 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
THBS1P07996 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THBS1P07996 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
THBS1P07996 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THBS1P07996 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THBS1P07996 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
THBS1P07996 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
THBS1P07996 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.69■□□□□ 0.9
THBS1P07996 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
THBS1P07996 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.68■□□□□ 0.9
THBS1P07996 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
THBS1P07996 Z92544.1-202ENST00000571933 1220 ntBASIC20.68■□□□□ 0.9
THBS1P07996 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
THBS1P07996 AC005703.6-201ENST00000623265 1329 ntBASIC20.68■□□□□ 0.9
THBS1P07996 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THBS1P07996 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.68■□□□□ 0.9
THBS1P07996 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
THBS1P07996 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.68■□□□□ 0.9
THBS1P07996 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
THBS1P07996 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THBS1P07996 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.67■□□□□ 0.9
THBS1P07996 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
THBS1P07996 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.67■□□□□ 0.9
THBS1P07996 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.67■□□□□ 0.9
THBS1P07996 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.67■□□□□ 0.9
THBS1P07996 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.67■□□□□ 0.9
THBS1P07996 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
THBS1P07996 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.67■□□□□ 0.9
THBS1P07996 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THBS1P07996 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THBS1P07996 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THBS1P07996 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.66■□□□□ 0.9
THBS1P07996 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THBS1P07996 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
THBS1P07996 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
THBS1P07996 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THBS1P07996 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
THBS1P07996 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.66■□□□□ 0.9
THBS1P07996 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THBS1P07996 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.66■□□□□ 0.9
THBS1P07996 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
THBS1P07996 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THBS1P07996 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THBS1P07996 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
THBS1P07996 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THBS1P07996 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.65■□□□□ 0.9
THBS1P07996 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.65■□□□□ 0.9
THBS1P07996 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THBS1P07996 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
THBS1P07996 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.64■□□□□ 0.89
THBS1P07996 KRT125P-201ENST00000546827 989 ntBASIC20.64■□□□□ 0.89
THBS1P07996 AC092028.1-203ENST00000608262 953 ntBASIC20.64■□□□□ 0.89
THBS1P07996 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
THBS1P07996 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THBS1P07996 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THBS1P07996 AL353803.4-201ENST00000565882 1934 ntBASIC20.64■□□□□ 0.89
THBS1P07996 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
THBS1P07996 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
THBS1P07996 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
THBS1P07996 AC144652.1-201ENST00000609974 1624 ntBASIC20.64■□□□□ 0.89
THBS1P07996 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.63■□□□□ 0.89
THBS1P07996 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms