Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV3P03979 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV3P03979 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV3P03979 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV3P03979 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
TRGV3P03979 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.63■□□□□ 0.41
TRGV3P03979 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.63■□□□□ 0.41
TRGV3P03979 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV3P03979 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRGV3P03979 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRGV3P03979 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV3P03979 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV3P03979 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV3P03979 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV3P03979 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRGV3P03979 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV3P03979 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRGV3P03979 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV3P03979 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.62■□□□□ 0.41
TRGV3P03979 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.62■□□□□ 0.41
TRGV3P03979 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV3P03979 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.62■□□□□ 0.41
TRGV3P03979 MIR3621-201ENST00000580529 85 ntBASIC17.62■□□□□ 0.41
TRGV3P03979 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRGV3P03979 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.62■□□□□ 0.41
TRGV3P03979 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV3P03979 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.61■□□□□ 0.41
TRGV3P03979 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.61■□□□□ 0.41
TRGV3P03979 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.61■□□□□ 0.41
TRGV3P03979 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.61■□□□□ 0.41
TRGV3P03979 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.61■□□□□ 0.41
TRGV3P03979 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.61■□□□□ 0.41
TRGV3P03979 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.61■□□□□ 0.41
TRGV3P03979 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.61■□□□□ 0.41
TRGV3P03979 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.61■□□□□ 0.41
TRGV3P03979 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV3P03979 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.6■□□□□ 0.41
TRGV3P03979 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.6■□□□□ 0.41
TRGV3P03979 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRGV3P03979 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV3P03979 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.59■□□□□ 0.41
TRGV3P03979 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.59■□□□□ 0.41
TRGV3P03979 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV3P03979 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRGV3P03979 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRGV3P03979 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRGV3P03979 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRGV3P03979 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.58■□□□□ 0.4
TRGV3P03979 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.58■□□□□ 0.4
TRGV3P03979 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.58■□□□□ 0.4
TRGV3P03979 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.58■□□□□ 0.4
TRGV3P03979 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV3P03979 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.57■□□□□ 0.4
TRGV3P03979 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRGV3P03979 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.57■□□□□ 0.4
TRGV3P03979 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.57■□□□□ 0.4
TRGV3P03979 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.57■□□□□ 0.4
TRGV3P03979 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.57■□□□□ 0.4
TRGV3P03979 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV3P03979 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.57■□□□□ 0.4
TRGV3P03979 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms