Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TIMP1P01033 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TIMP1P01033 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
TIMP1P01033 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.73■■□□□ 1.55
TIMP1P01033 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.73■■□□□ 1.55
TIMP1P01033 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TIMP1P01033 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.72■■□□□ 1.55
TIMP1P01033 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.72■■□□□ 1.55
TIMP1P01033 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.72■■□□□ 1.55
TIMP1P01033 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.72■■□□□ 1.55
TIMP1P01033 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.72■■□□□ 1.55
TIMP1P01033 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.72■■□□□ 1.55
TIMP1P01033 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TIMP1P01033 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
TIMP1P01033 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TIMP1P01033 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.71■■□□□ 1.55
TIMP1P01033 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TIMP1P01033 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TIMP1P01033 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.71■■□□□ 1.55
TIMP1P01033 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.71■■□□□ 1.55
TIMP1P01033 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TIMP1P01033 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.71■■□□□ 1.55
TIMP1P01033 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TIMP1P01033 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
TIMP1P01033 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
TIMP1P01033 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TIMP1P01033 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.7■■□□□ 1.55
TIMP1P01033 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TIMP1P01033 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.7■■□□□ 1.54
TIMP1P01033 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TIMP1P01033 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TIMP1P01033 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TIMP1P01033 AC006015.1-201ENST00000429970 570 ntBASIC24.7■■□□□ 1.54
TIMP1P01033 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.7■■□□□ 1.54
TIMP1P01033 RAP2CP1-201ENST00000605103 478 ntBASIC24.7■■□□□ 1.54
TIMP1P01033 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TIMP1P01033 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TIMP1P01033 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.69■■□□□ 1.54
TIMP1P01033 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.69■■□□□ 1.54
TIMP1P01033 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.69■■□□□ 1.54
TIMP1P01033 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
TIMP1P01033 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
TIMP1P01033 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.69■■□□□ 1.54
TIMP1P01033 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.69■■□□□ 1.54
TIMP1P01033 AC010525.1-201ENST00000585559 441 ntBASIC24.69■■□□□ 1.54
TIMP1P01033 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.69■■□□□ 1.54
TIMP1P01033 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.68■■□□□ 1.54
TIMP1P01033 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TIMP1P01033 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TIMP1P01033 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TIMP1P01033 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TIMP1P01033 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.68■■□□□ 1.54
TIMP1P01033 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.68■■□□□ 1.54
TIMP1P01033 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TIMP1P01033 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TIMP1P01033 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TIMP1P01033 AC091060.1-201ENST00000623524 1766 ntBASIC24.67■■□□□ 1.54
TIMP1P01033 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TIMP1P01033 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.67■■□□□ 1.54
TIMP1P01033 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
TIMP1P01033 CDCA4P2-201ENST00000441182 718 ntBASIC24.67■■□□□ 1.54
TIMP1P01033 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TIMP1P01033 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.67■■□□□ 1.54
TIMP1P01033 AL499627.2-201ENST00000606283 725 ntBASIC24.67■■□□□ 1.54
TIMP1P01033 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.67■■□□□ 1.54
TIMP1P01033 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.67■■□□□ 1.54
TIMP1P01033 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TIMP1P01033 ALDH1A3-203ENST00000557963 1670 ntBASIC24.66■■□□□ 1.54
TIMP1P01033 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.66■■□□□ 1.54
TIMP1P01033 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TIMP1P01033 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TIMP1P01033 OR2I1P-207ENST00000453522 948 ntBASIC24.66■■□□□ 1.54
TIMP1P01033 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TIMP1P01033 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.66■■□□□ 1.54
TIMP1P01033 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.66■■□□□ 1.54
TIMP1P01033 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
TIMP1P01033 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TIMP1P01033 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TIMP1P01033 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TIMP1P01033 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.66■■□□□ 1.54
TIMP1P01033 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TIMP1P01033 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.66■■□□□ 1.54
TIMP1P01033 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TIMP1P01033 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TIMP1P01033 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TIMP1P01033 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.65■■□□□ 1.54
TIMP1P01033 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TIMP1P01033 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.65■■□□□ 1.54
TIMP1P01033 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TIMP1P01033 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TIMP1P01033 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TIMP1P01033 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TIMP1P01033 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.64■■□□□ 1.54
TIMP1P01033 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.64■■□□□ 1.54
TIMP1P01033 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.64■■□□□ 1.54
TIMP1P01033 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.64■■□□□ 1.54
TIMP1P01033 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TIMP1P01033 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.64■■□□□ 1.54
TIMP1P01033 AC073111.5-205ENST00000641717 521 ntBASIC24.64■■□□□ 1.54
TIMP1P01033 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms