Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BEST1O76090 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BEST1O76090 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
BEST1O76090 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
BEST1O76090 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.74■■□□□ 1.39
BEST1O76090 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
BEST1O76090 AL139246.5-201ENST00000606645 996 ntBASIC23.74■■□□□ 1.39
BEST1O76090 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
BEST1O76090 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BEST1O76090 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BEST1O76090 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
BEST1O76090 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BEST1O76090 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.73■■□□□ 1.39
BEST1O76090 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BEST1O76090 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
BEST1O76090 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BEST1O76090 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BEST1O76090 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BEST1O76090 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BEST1O76090 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
BEST1O76090 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BEST1O76090 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
BEST1O76090 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BEST1O76090 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.71■■□□□ 1.39
BEST1O76090 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.71■■□□□ 1.39
BEST1O76090 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BEST1O76090 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BEST1O76090 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.7■■□□□ 1.38
BEST1O76090 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BEST1O76090 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
BEST1O76090 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BEST1O76090 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BEST1O76090 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BEST1O76090 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
BEST1O76090 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.69■■□□□ 1.38
BEST1O76090 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
BEST1O76090 AC079630.1-202ENST00000618127 1840 ntBASIC23.69■■□□□ 1.38
BEST1O76090 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
BEST1O76090 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.69■■□□□ 1.38
BEST1O76090 SERBP1P1-201ENST00000396021 1160 ntBASIC23.69■■□□□ 1.38
BEST1O76090 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
BEST1O76090 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.69■■□□□ 1.38
BEST1O76090 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BEST1O76090 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BEST1O76090 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.69■■□□□ 1.38
BEST1O76090 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
BEST1O76090 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.69■■□□□ 1.38
BEST1O76090 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
BEST1O76090 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.68■■□□□ 1.38
BEST1O76090 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BEST1O76090 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BEST1O76090 MIR638-201ENST00000385237 100 ntBASIC23.68■■□□□ 1.38
BEST1O76090 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
BEST1O76090 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.68■■□□□ 1.38
BEST1O76090 AL136162.1-201ENST00000607711 1078 ntBASIC23.68■■□□□ 1.38
BEST1O76090 AC241377.3-202ENST00000626088 1088 ntBASIC23.68■■□□□ 1.38
BEST1O76090 AC241585.3-202ENST00000628937 1088 ntBASIC23.68■■□□□ 1.38
BEST1O76090 AC245100.8-202ENST00000629247 1058 ntBASIC23.68■■□□□ 1.38
BEST1O76090 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.68■■□□□ 1.38
BEST1O76090 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.68■■□□□ 1.38
BEST1O76090 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
BEST1O76090 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BEST1O76090 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
BEST1O76090 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.67■■□□□ 1.38
BEST1O76090 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
BEST1O76090 SYT6-210ENST00000641643 1587 ntBASIC23.67■■□□□ 1.38
BEST1O76090 PBX2P1-201ENST00000493219 1291 ntBASIC23.67■■□□□ 1.38
BEST1O76090 AC024257.2-201ENST00000549699 147 ntBASIC23.67■■□□□ 1.38
BEST1O76090 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.67■■□□□ 1.38
BEST1O76090 AC009086.3-201ENST00000623486 1008 ntBASIC23.67■■□□□ 1.38
BEST1O76090 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.67■■□□□ 1.38
BEST1O76090 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.67■■□□□ 1.38
BEST1O76090 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
BEST1O76090 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
BEST1O76090 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
BEST1O76090 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.66■■□□□ 1.38
BEST1O76090 AC144652.1-201ENST00000609974 1624 ntBASIC23.66■■□□□ 1.38
BEST1O76090 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.66■■□□□ 1.38
BEST1O76090 AC106739.1-201ENST00000617035 715 ntBASIC23.66■■□□□ 1.38
BEST1O76090 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.66■■□□□ 1.38
BEST1O76090 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
BEST1O76090 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BEST1O76090 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BEST1O76090 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
BEST1O76090 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms